Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_19245 and IAI47_19250 are separated by 272 nucleotidesIAI47_19250 and IAI47_19255 are separated by 21 nucleotidesIAI47_19255 and IAI47_19260 are separated by 34 nucleotidesIAI47_19260 and IAI47_19265 overlap by 4 nucleotides IAI47_19245: IAI47_19245 - SIS domain-containing protein, at 74,989 to 75,549 _19245 IAI47_19250: IAI47_19250 - sugar ABC transporter ATP-binding protein, at 75,822 to 77,330 _19250 IAI47_19255: IAI47_19255 - substrate-binding domain-containing protein, at 77,352 to 78,332 _19255 IAI47_19260: IAI47_19260 - ABC transporter permease, at 78,367 to 79,392 _19260 IAI47_19265: IAI47_19265 - xylulokinase, at 79,389 to 80,837 _19265
Group Condition IAI47_19245 IAI47_19250 IAI47_19255 IAI47_19260 IAI47_19265
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.5 -0.2 +0.1 +0.2 -0.4
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -2.1 -0.1 +0.1 +0.5 -0.0
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.3 -0.3 -0.3 -0.5 -0.1
carbon source Ying_Others16 rep B; time point 1 -1.0 +0.1 -0.1 +0.0 -0.3
stress copper (II) chloride 2 uM, anaerobic -0.5 -0.5 +0.2 -0.1 -0.2
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.6 +0.2 +0.1 -0.5 -0.2
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.9 +0.0 -0.3 +0.2 -0.0
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 -1.2 -0.0 +0.3 -0.0 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50 -1.0 +0.1 +0.2 -0.2 +0.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 +0.2 -0.2 +0.2 -0.4
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.1 -0.1 +0.3 +0.0 +0.2
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.9 +0.1 -0.2 +0.5 +0.0
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 -1.0 +0.2 +0.4 +0.1 -0.1
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -1.2 +0.2 +0.5 +0.0 +0.3
nitrogen source TNT (N) -0.9 -0.1 +0.1 +0.3 +0.3
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.8 +0.2 -0.1 +0.2 +0.3
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.6 -0.1 -0.3 -0.2 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.1 +0.2 +0.5 -0.1 +0.4
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.4 +0.2 -0.0 -0.5 -0.2
survival Survival; Treatment=FW106 (pH3.9); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 -0.0 +0.4 +0.3 -0.5
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.7 +0.1 +0.3 +0.1 +0.4
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 +0.3 +0.3 -0.1 +0.2
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.5 -0.0 +0.4 +0.4 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 -0.4 +0.3 +0.3 +0.1 +0.5
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.4 +0.2 +0.5 +0.4 +0.4
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.7 -0.2 +0.4 -0.2 +0.4
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.6 +0.5 +0.8 +0.4 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.4 +0.5 +0.5 +0.2 +0.6
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 +0.3 +0.6 +0.5 +0.1
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.7 +0.5 +0.1 +0.3 +0.2
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IAI47_19245
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IAI47_19250
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IAI47_19260
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IAI47_19265
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