Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_19205 and IAI47_19210 are separated by 135 nucleotidesIAI47_19210 and IAI47_19215 are separated by 326 nucleotidesIAI47_19215 and IAI47_19220 are separated by 495 nucleotidesIAI47_19220 and IAI47_19225 are separated by 18 nucleotides IAI47_19205: IAI47_19205 - transporter substrate-binding domain-containing protein, at 68,438 to 69,223 _19205 IAI47_19210: IAI47_19210 - tyrosine-type recombinase/integrase, at 69,359 to 69,607 _19210 IAI47_19215: IAI47_19215 - hypothetical protein, at 69,934 to 70,905 _19215 IAI47_19220: IAI47_19220 - PTS galactitol transporter subunit IIA, at 71,401 to 71,850 _19220 IAI47_19225: IAI47_19225 - PTS sugar transporter subunit IIB, at 71,869 to 72,162 _19225
Group Condition IAI47_19205 IAI47_19210 IAI47_19215 IAI47_19220 IAI47_19225
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.3 -0.6 -0.5 -1.2
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 +0.1 -0.8 -1.7 +0.3
carbon source Ying_Others16 rep C; time point 3 -0.1 -0.0 -1.4 -0.3 -0.1
carbon source Ying_Others16 rep B; time point 2 -0.1 -0.0 -1.3 -0.2 -0.1
carbon source Ying_AminoAcid20 rep A; time point 3 -0.1 -0.1 -1.2 -0.3 +0.0
stress copper (II) chloride 2 uM, anaerobic -0.6 -0.5 -0.1 -0.1 -0.3
carbon source Ying_Others16 rep A; time point 3 -0.0 -0.0 -1.4 -0.1 +0.0
carbon source Ying_AminoAcid20 rep C; time point 2 -0.1 +0.1 -1.4 -0.2 +0.1
carbon source Ying_Others16 rep B; time point 3 -0.1 +0.0 -1.2 -0.1 -0.0
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 +0.2 -0.5 -0.1 -0.9
carbon source Ying_Others16 rep B; time point 1 -0.2 +0.0 -0.9 -0.1 -0.3
carbon source Ying_Others16 rep A; time point 2 +0.1 -0.1 -1.4 -0.1 +0.1
carbon source Ying_AminoAcid20 rep C; time point 3 -0.2 +0.1 -1.1 -0.2 +0.1
carbon source Ying_AminoAcid20 rep A; time point 2 -0.1 +0.1 -1.2 -0.2 +0.2
carbon source Ying_all64 rep B; time point 2 -0.2 -0.2 -0.9 -0.1 +0.2
carbon source Ying_Others16 rep C; time point 1 -0.1 +0.0 -1.0 -0.1 +0.3
carbon source Ying_AminoAcid20 rep B; time point 2 +0.1 +0.1 -1.3 +0.1 +0.2
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.2 -0.1 +0.1 -1.0
carbon source Ying_all64 rep A; time point 2 -0.0 -0.2 -0.8 -0.2 +0.4
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 -0.2 -0.4 +0.4 -0.6
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 +0.2 -0.2 -0.3 -0.6
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50 +0.0 +0.4 +0.3 -0.7 -0.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 +0.0 +0.4 +0.3 -0.4 -0.5
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 +0.0 -1.0 +0.5 +0.1
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.5 +0.3 -0.4 -0.0 +0.6
stress copper (II) chloride 2 uM, anaerobic +0.4 -0.7 +0.0 +0.7 -0.3
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 +0.1 -0.7 +0.5 +0.4
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.6 -0.4 +0.1 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.0 +0.6 +0.6 -0.5 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.4 +0.4 +0.5 -0.1 +0.2
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IAI47_19205
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IAI47_19210
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IAI47_19220
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IAI47_19225
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