Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_19195 and IAI47_19200 are separated by 286 nucleotidesIAI47_19200 and IAI47_19205 are separated by 827 nucleotidesIAI47_19205 and IAI47_19210 are separated by 135 nucleotidesIAI47_19210 and IAI47_19215 are separated by 326 nucleotides IAI47_19195: IAI47_19195 - acetyltransferase, at 66,440 to 66,883 _19195 IAI47_19200: IAI47_19200 - GNAT family N-acetyltransferase, at 67,170 to 67,610 _19200 IAI47_19205: IAI47_19205 - transporter substrate-binding domain-containing protein, at 68,438 to 69,223 _19205 IAI47_19210: IAI47_19210 - tyrosine-type recombinase/integrase, at 69,359 to 69,607 _19210 IAI47_19215: IAI47_19215 - hypothetical protein, at 69,934 to 70,905 _19215
Group Condition IAI47_19195 IAI47_19200 IAI47_19205 IAI47_19210 IAI47_19215
carbon source Ying_Others16 rep B; time point 2 -0.1 -0.2 -0.1 -0.0 -1.3
carbon source Ying_AminoAcid20 rep C; time point 2 -0.1 -0.2 -0.1 +0.1 -1.4
carbon source Ying_Others16 rep C; time point 3 -0.1 -0.1 -0.1 -0.0 -1.4
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 -0.7 +0.1 +0.1 -0.6
carbon source Ying_all64 rep B; time point 2 -0.3 -0.1 -0.2 -0.2 -0.9
carbon source Ying_Others16 rep A; time point 2 -0.2 +0.0 +0.1 -0.1 -1.4
carbon source Ying_Others16 rep A; time point 3 -0.3 +0.1 -0.0 -0.0 -1.4
carbon source Ying_AminoAcid20 rep A; time point 3 -0.0 -0.1 -0.1 -0.1 -1.2
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 -0.2 -0.2 +0.1 -0.8
carbon source Ying_Others16 rep B; time point 1 -0.1 -0.2 -0.2 +0.0 -0.9
carbon source Ying_Others16 rep C; time point 2 +0.0 -0.0 -0.1 +0.0 -1.3
carbon source Ying_Others16 rep B; time point 3 -0.0 +0.1 -0.1 +0.0 -1.2
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -0.4 +0.2 -0.3 -0.6
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 -0.5 -0.4 -0.5 -0.1
carbon source Ying_all64 rep C; time point 3 -0.3 +0.1 -0.0 -0.2 -0.9
carbon source Ying_AminoAcid20 rep C; time point 3 +0.0 +0.1 -0.2 +0.1 -1.1
carbon source Ying_AminoAcid20 rep A; time point 2 -0.0 +0.1 -0.1 +0.1 -1.2
carbon source Ying_AminoAcid20 rep B; time point 2 +0.0 +0.1 +0.1 +0.1 -1.3
carbon source Ying_all64 rep B; time point 3 -0.1 +0.3 -0.2 -0.0 -1.0
carbon source Ying_AminoAcid20 rep B; time point 1 -0.1 +0.1 +0.1 +0.1 -1.1
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.4 +0.1 -0.5 +0.3 -0.4
stress copper (II) chloride 2 uM, anaerobic +0.1 +0.2 -0.4 -0.4 -0.3
stress copper (II) chloride 2 uM, anaerobic +0.5 -0.1 -0.6 -0.5 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 +0.4 +0.3 +0.0 -1.0
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 -0.4 -0.3 +0.3 -0.2
stress copper (II) chloride 2 uM, anaerobic +0.1 -0.2 +0.4 -0.7 +0.0
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=12hrs; Outgrowth=LBkan50 +0.4 +0.5 +0.0 +0.5 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.7 -0.1 +0.4 +0.4 +0.5
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.3 +0.5 +0.2 +0.5 +0.4
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.3 +0.4 -0.0 +0.6 +0.6
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IAI47_19195
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IAI47_19200
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IAI47_19210
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IAI47_19215
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