Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_19160 and IAI47_19165 are separated by 184 nucleotidesIAI47_19165 and IAI47_19170 are separated by 219 nucleotidesIAI47_19170 and IAI47_19175 are separated by 272 nucleotidesIAI47_19175 and IAI47_19180 are separated by 200 nucleotides IAI47_19160: IAI47_19160 - MCP four helix bundle domain-containing protein, at 58,329 to 59,969 _19160 IAI47_19165: IAI47_19165 - peptidase, at 60,154 to 60,789 _19165 IAI47_19170: IAI47_19170 - DUF4236 domain-containing protein, at 61,009 to 62,187 _19170 IAI47_19175: IAI47_19175 - GNAT family N-acetyltransferase, at 62,460 to 63,008 _19175 IAI47_19180: IAI47_19180 - HAMP domain-containing protein, at 63,209 to 65,146 _19180
Group Condition IAI47_19160 IAI47_19165 IAI47_19170 IAI47_19175 IAI47_19180
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 -0.2 -0.3 -0.2 -0.2
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 -0.3 -0.3 -0.1 -0.0
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 +0.2 -0.6 -0.2 -0.2
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.0 -0.3 -0.4 +0.1 -0.2
stress copper (II) chloride 2 uM, anaerobic -0.2 -0.2 -0.2 +0.1 -0.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 -0.3 -0.3 +0.2 -0.3
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 +0.0 -0.1 -0.3 -0.3
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.3 -0.2 +0.1 +0.1 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50 +0.1 -0.2 -0.2 -0.2 +0.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.0 -0.4 -0.1 +0.2 -0.0
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 -0.1 -0.3 +0.3 -0.2
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 +0.0 +0.0 +0.2 -0.5
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.3 -0.5 +0.0 -0.1 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 +0.1 -0.1 +0.2 -0.3 -0.2
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.2 -0.3 +0.1 -0.2
stress copper (II) chloride 2 uM, anaerobic +0.1 -0.2 -0.2 -0.3 +0.3
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.3 -0.2 -0.3 -0.2 +0.2
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.0 -0.1 -0.4 +0.3 +0.0
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.2 -0.1 +0.3 -0.2
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.2 +0.2 +0.1 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=6hrs; Outgrowth=LBkan50 +0.1 -0.3 -0.1 +0.2 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 +0.2 -0.2 -0.1 +0.3 -0.0
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 -0.1 +0.3 +0.2 +0.0
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 -0.4 -0.0 +0.2 +0.2
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -0.0 +0.2 +0.2 +0.2
carbon source Ying_Nucleobase14 rep B; time point 1 +0.3 +0.1 +0.2 -0.2 +0.0
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 +0.2 -0.1 +0.2 +0.2
stress Manganese (II) chloride tetrahydrate 50 uM, anaerobic +0.0 +0.1 +0.4 +0.1 -0.2
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 +0.2 +0.2 +0.3 -0.2
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 +0.3 -0.2 +0.2 +0.2
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IAI47_19160
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IAI47_19165
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IAI47_19175
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IAI47_19180
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