Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_19125 and IAI47_19130 are separated by 274 nucleotidesIAI47_19130 and IAI47_19135 are separated by 74 nucleotidesIAI47_19135 and IAI47_19140 are separated by 307 nucleotidesIAI47_19140 and IAI47_19145 are separated by 93 nucleotides IAI47_19125: IAI47_19125 - hypothetical protein, at 51,715 to 51,978 _19125 IAI47_19130: IAI47_19130 - LysR family transcriptional regulator, at 52,253 to 53,107 _19130 IAI47_19135: IAI47_19135 - DMT family transporter, at 53,182 to 54,123 _19135 IAI47_19140: IAI47_19140 - helix-turn-helix transcriptional regulator, at 54,431 to 54,757 _19140 IAI47_19145: IAI47_19145 - SDR family oxidoreductase, at 54,851 to 55,600 _19145
Group Condition IAI47_19125 IAI47_19130 IAI47_19135 IAI47_19140 IAI47_19145
stress copper (II) chloride 2 uM, anaerobic -1.0 -0.4 +0.1 +0.1 -0.4
stress copper (II) chloride 2 uM, anaerobic -0.0 -0.7 -0.2 +0.4 -0.6
carbon source Ying_sugar7 rep C; time point 2 -0.0 -0.4 -0.1 -0.7 +0.3
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 +0.0 -0.2 -0.6 -0.5
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50 -1.1 -0.5 +0.2 +0.6 +0.2
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.2 +0.5 -0.2 -0.0 +0.3
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 +0.3 -0.2 -0.6 +0.3
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.7 -0.0 -0.4 -0.8 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -0.1 +0.0 +0.9 -0.3
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.6 -0.0 -0.0 +0.6 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50 -0.7 -0.1 +0.1 +1.0 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -0.3 -0.3 +1.1 -0.1
stress copper (II) chloride 2 uM, anaerobic +0.6 +0.1 +0.2 -0.5 -0.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.4 -0.3 +0.0 +0.8 -0.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.1 +0.3 +0.9 -0.4
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.0 -0.3 +0.3 +0.8 +0.4
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 -0.1 +0.2 +0.8 +0.4
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50 +0.5 -0.3 +0.2 +0.7 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=1hrs; Outgrowth=LBkan50 +0.5 +0.1 +0.0 +0.8 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 +0.7 -0.1 -0.0 +0.5 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 +0.3 -0.2 +0.2 +0.8 +0.3
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 -0.1 +0.4 +0.7 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 -0.3 +0.2 +1.4 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=12hrs; Outgrowth=LBkan50 +0.3 -0.0 +0.1 +0.7 +0.4
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.1 +0.1 +1.3 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.4 -0.2 +0.6 +1.7 +0.0
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 -0.1 +0.1 +1.4 +0.4
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 -0.1 +0.2 +1.7 -0.0
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.4 +0.1 +0.2 +1.3 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.0 -0.1 +0.7 +1.6 +0.2
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IAI47_19125
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IAI47_19130
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IAI47_19140
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IAI47_19145
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