Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_19035 and IAI47_19040 are separated by 160 nucleotidesIAI47_19040 and IAI47_19045 are separated by 195 nucleotidesIAI47_19045 and IAI47_19050 are separated by 246 nucleotidesIAI47_19050 and IAI47_19055 are separated by 444 nucleotides IAI47_19035: IAI47_19035 - transcriptional regulator, at 37,810 to 38,064 _19035 IAI47_19040: IAI47_19040 - hypothetical protein, at 38,225 to 38,518 _19040 IAI47_19045: IAI47_19045 - two-component-system connector protein YcgZ, at 38,714 to 38,959 _19045 IAI47_19050: IAI47_19050 - hypothetical protein, at 39,206 to 39,499 _19050 IAI47_19055: IAI47_19055 - metal ABC transporter substrate-binding protein, at 39,944 to 40,858 _19055
Group Condition IAI47_19035 IAI47_19040 IAI47_19045 IAI47_19050 IAI47_19055
stress copper (II) chloride 2 uM, anaerobic -2.2 +0.2 -1.5 -0.4 +0.2
nitrogen source Ammonium chloride (N) +0.4 -1.4 +0.0 -1.6 -0.2
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -2.7 -0.5 +0.6 -0.1 +0.1
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.9 +0.6 -0.1 -1.1 -0.2
stress copper (II) chloride 2 uM, anaerobic -2.2 +0.5 -1.3 +1.2 -0.3
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -2.5 -0.1 +1.4 -0.7 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=6hrs; Outgrowth=LBkan50 +1.1 -0.6 +0.2 -1.6 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50 -1.7 +0.4 +0.9 -0.3 +0.4
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.4 +0.4 -0.4 +1.1 +0.4
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 -0.3 +0.3 +1.6 -1.3 +0.3
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +1.9 +0.7 +0.0 -0.8 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +1.2 +0.9 +0.9 -0.6 +0.3
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.7 +0.8 +1.0 +1.1 +0.5
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=1hrs; Outgrowth=LBkan50 +0.6 +0.8 +1.4 -0.5 +0.6
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 +1.2 +0.8 +1.1 +0.3
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.7 +1.2 +1.0 -0.3 +0.5
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 +1.0 +1.5 +0.5 +0.3
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.3 +0.9 +1.1 +1.1 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.7 +0.9 +1.5 +0.4 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 +0.5 +1.3 +1.2 +0.4 +0.5
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +1.8 +1.4 +1.1 -0.3 +0.4
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +1.3 +0.9 +1.1 +0.7 +0.4
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.6 +1.5 +1.6 +1.6 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.9 +1.1 +1.8 +0.8 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.9 +1.0 +1.4 +1.3 +0.4
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.4 +1.4 +2.4 +0.7 +0.5
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +1.8 +1.7 +2.5 -0.0 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +2.4 +1.5 +1.6 +0.4 +0.7
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +3.3 +1.1 +2.5 +0.6 +0.8
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +3.8 +0.8 +2.7 +1.1 +1.1
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IAI47_19035
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IAI47_19040
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IAI47_19055
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