Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_18975 and IAI47_18980 are separated by 43 nucleotidesIAI47_18980 and IAI47_18985 overlap by 4 nucleotidesIAI47_18985 and IAI47_18990 are separated by 137 nucleotidesIAI47_18990 and IAI47_18995 are separated by 67 nucleotides IAI47_18975: IAI47_18975 - B3/4 domain-containing protein, at 28,218 to 28,913 _18975 IAI47_18980: IAI47_18980 - helix-turn-helix domain-containing protein, at 28,957 to 29,559 _18980 IAI47_18985: IAI47_18985 - MarR family transcriptional regulator, at 29,556 to 30,071 _18985 IAI47_18990: IAI47_18990 - MFS transporter, at 30,209 to 31,363 _18990 IAI47_18995: IAI47_18995 - aspartate/glutamate racemase family protein, at 31,431 to 32,123 _18995
Group Condition IAI47_18975 IAI47_18980 IAI47_18985 IAI47_18990 IAI47_18995
carbon source Ying_sugar7 rep C; time point 2 -0.4 -0.5 -1.3 +0.3 -0.2
stress copper (II) chloride 2 uM, anaerobic -0.1 +0.2 -1.4 -0.4 -0.1
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.5 -1.8 -0.3 +0.1 -0.1
stress copper (II) chloride 2 uM, anaerobic -0.2 -0.7 +0.8 -0.6 -0.1
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 -0.5 +0.3 +0.3 -0.2
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.5 +0.1 -0.8 +0.2 -0.3
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 +0.2 -0.9 +0.3 +0.3
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 +0.6 -0.4 +0.5 -0.2
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.5 -0.5 +0.6 -0.1 +0.1
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.0 +0.8 -0.7 +0.4 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 +0.2 +0.5 +0.7 -0.3
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 +0.3 +0.8 +0.4 -0.3
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.5 -0.4 +0.6 +0.1 +0.4
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 +0.5 +0.6 +0.4 -0.5
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 +0.4 +1.0 +0.3 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 +0.2 +0.5 +0.5 +0.5 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.5 +0.6 +0.5 -0.2
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.4 +0.7 +0.8 +0.5 +0.0
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.0 +0.4 +0.9 +0.3 -0.0
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50 +0.2 +0.2 +0.8 +0.6 -0.1
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 +0.4 +0.5 +0.3 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 +0.1 +0.8 +0.4 +0.2
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.7 +0.3 +0.5 +0.3 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 +0.4 +1.3 +0.2 +0.0
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 +1.0 +0.5 +0.5 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.5 +0.0 +0.7 +0.6 +0.4
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 +1.2 +1.0 +0.3 -0.0
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.5 +0.4 +1.0 +0.7 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 +1.0 +1.1 +0.5 +0.0
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.7 +0.2 +0.9 +0.7 +0.2
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IAI47_18975
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IAI47_18980
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IAI47_18990
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IAI47_18995
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