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Protein
Homologs
Fitness for 5 genes in
Pantoea sp. MT58
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
IAI47_18915 and IAI47_18920 are separated by 391 nucleotides
IAI47_18920 and IAI47_18925 overlap by 47 nucleotides
IAI47_18925 and IAI47_18930 are separated by 96 nucleotides
IAI47_18930 and IAI47_18935 overlap by 1 nucleotides
IAI47_18915: IAI47_18915 - GNAT family N-acetyltransferase, at 20,758 to 21,312
_18915
IAI47_18920: IAI47_18920 - TetR/AcrR family transcriptional regulator, at 21,704 to 22,291
_18920
IAI47_18925: IAI47_18925 - LysR family transcriptional regulator, at 22,245 to 23,138
_18925
IAI47_18930: IAI47_18930 - carboxymuconolactone decarboxylase family protein, at 23,235 to 23,540
_18930
IAI47_18935: IAI47_18935 - tautomerase family protein, at 23,540 to 23,929
_18935
Group
Condition
IAI47
_18915
IAI47
_18920
IAI47
_18925
IAI47
_18930
IAI47
_18935
survival
Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.0
+0.1
-1.3
-0.2
-0.9
survival
Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.1
-0.4
-0.3
-0.8
-0.4
survival
Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.2
-0.6
-0.5
+0.1
-0.7
stress
Manganese (II) chloride tetrahydrate 50 uM, aerobic
+0.1
-0.1
+0.3
-0.7
-0.5
survival
Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
+0.3
-0.4
-0.5
-0.4
+0.1
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=1hrs; Outgrowth=LBkan50
-0.1
+0.5
+0.0
-1.0
-0.1
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50
-0.2
+0.9
-0.1
-0.9
-0.4
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50
-0.4
+0.4
+0.1
-0.9
+0.2
survival
Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-0.0
-0.3
+0.1
+0.5
-0.9
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.2
-0.3
+0.2
-0.8
+0.4
stress
copper (II) chloride 2 uM, anaerobic
-0.2
+0.2
-0.4
-0.3
+0.7
survival
Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.0
-0.3
+0.3
+0.5
-0.6
nitrogen source
Ammonium chloride (N)
+0.0
-0.3
+0.1
+0.8
-0.8
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=12hrs; Outgrowth=LBkan50
-0.2
+0.7
+0.1
-0.7
-0.0
survival
Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.3
-0.5
+0.7
-0.3
-0.0
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.4
+0.6
+0.4
-0.5
+0.1
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-0.5
+0.0
+0.6
-0.2
+0.6
survival
Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
+0.1
+0.3
-0.1
+0.9
-0.5
survival
Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.1
+0.5
-0.2
+0.9
-0.5
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.2
-0.6
-0.3
+1.0
+0.6
stress
copper (II) chloride 2 uM, anaerobic
-0.3
-0.1
-0.0
+0.7
+0.6
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50
-0.2
+0.4
+0.4
-0.3
+0.7
survival
Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-0.2
+0.4
-0.0
+0.9
+0.4
survival
Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-0.1
-0.1
+0.1
+1.5
+0.1
survival
Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
+0.2
-0.0
+0.2
+1.0
+0.3
survival
Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
+0.1
+0.3
+0.5
+0.1
+0.8
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-0.2
+0.9
+0.5
+0.4
+0.2
survival
Survival; Treatment=FW106 (pH3.9); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
+0.2
-0.7
+0.3
+1.5
+0.8
survival
Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.0
-0.1
+0.3
+1.2
+0.6
survival
Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
+0.1
-0.0
+0.7
+1.1
+0.2
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IAI47_18925
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