Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_18915 and IAI47_18920 are separated by 391 nucleotidesIAI47_18920 and IAI47_18925 overlap by 47 nucleotidesIAI47_18925 and IAI47_18930 are separated by 96 nucleotidesIAI47_18930 and IAI47_18935 overlap by 1 nucleotides IAI47_18915: IAI47_18915 - GNAT family N-acetyltransferase, at 20,758 to 21,312 _18915 IAI47_18920: IAI47_18920 - TetR/AcrR family transcriptional regulator, at 21,704 to 22,291 _18920 IAI47_18925: IAI47_18925 - LysR family transcriptional regulator, at 22,245 to 23,138 _18925 IAI47_18930: IAI47_18930 - carboxymuconolactone decarboxylase family protein, at 23,235 to 23,540 _18930 IAI47_18935: IAI47_18935 - tautomerase family protein, at 23,540 to 23,929 _18935
Group Condition IAI47_18915 IAI47_18920 IAI47_18925 IAI47_18930 IAI47_18935
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.0 +0.1 -1.3 -0.2 -0.9
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -0.4 -0.3 -0.8 -0.4
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.6 -0.5 +0.1 -0.7
stress Manganese (II) chloride tetrahydrate 50 uM, aerobic +0.1 -0.1 +0.3 -0.7 -0.5
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.3 -0.4 -0.5 -0.4 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=1hrs; Outgrowth=LBkan50 -0.1 +0.5 +0.0 -1.0 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50 -0.2 +0.9 -0.1 -0.9 -0.4
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 -0.4 +0.4 +0.1 -0.9 +0.2
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.0 -0.3 +0.1 +0.5 -0.9
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.3 +0.2 -0.8 +0.4
stress copper (II) chloride 2 uM, anaerobic -0.2 +0.2 -0.4 -0.3 +0.7
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 -0.3 +0.3 +0.5 -0.6
nitrogen source Ammonium chloride (N) +0.0 -0.3 +0.1 +0.8 -0.8
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=12hrs; Outgrowth=LBkan50 -0.2 +0.7 +0.1 -0.7 -0.0
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 -0.5 +0.7 -0.3 -0.0
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 +0.6 +0.4 -0.5 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.5 +0.0 +0.6 -0.2 +0.6
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 +0.3 -0.1 +0.9 -0.5
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.5 -0.2 +0.9 -0.5
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.6 -0.3 +1.0 +0.6
stress copper (II) chloride 2 uM, anaerobic -0.3 -0.1 -0.0 +0.7 +0.6
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 -0.2 +0.4 +0.4 -0.3 +0.7
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 +0.4 -0.0 +0.9 +0.4
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 -0.1 +0.1 +1.5 +0.1
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 -0.0 +0.2 +1.0 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 +0.3 +0.5 +0.1 +0.8
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 +0.9 +0.5 +0.4 +0.2
survival Survival; Treatment=FW106 (pH3.9); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 -0.7 +0.3 +1.5 +0.8
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 -0.1 +0.3 +1.2 +0.6
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 -0.0 +0.7 +1.1 +0.2
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