Fitness for 5 genes in Pantoea sp. MT58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 309 experiments or choose conditions or try the comparative fitness browser

500 ntIAI47_18700 and IAI47_18705 are separated by 95 nucleotidesIAI47_18705 and IAI47_18710 are separated by 64 nucleotidesIAI47_18710 and IAI47_18715 are separated by 103 nucleotidesIAI47_18715 and IAI47_18720 are separated by 9 nucleotides IAI47_18700: IAI47_18700 - PTS mannitol transporter subunit IICBA, at 3,988,712 to 3,990,646 _18700 IAI47_18705: IAI47_18705 - mannitol-1-phosphate 5-dehydrogenase, at 3,990,742 to 3,991,890 _18705 IAI47_18710: IAI47_18710 - MltR family transcriptional regulator, at 3,991,955 to 3,992,500 _18710 IAI47_18715: IAI47_18715 - YibL family ribosome-associated protein, at 3,992,604 to 3,992,966 _18715 IAI47_18720: IAI47_18720 - DUF535 domain-containing protein, at 3,992,976 to 3,993,944 _18720
Group Condition IAI47_18700 IAI47_18705 IAI47_18710 IAI47_18715 IAI47_18720
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -0.5 -0.2 -4.4 +0.3
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -1.4 -0.4 -3.0 +0.1
carbon source Ying_sugar7 rep A; time point 3 +0.1 -4.3 +0.0 -0.3 -0.2
carbon source Ying_all64 rep B; time point 3 +0.1 -3.2 -0.2 -1.0 +0.0
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 -0.2 -0.3 -2.9 -0.3
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -0.5 -0.1 -3.1 -0.1
carbon source Ying_sugar7 rep C; time point 3 +0.1 -4.1 +0.3 -0.1 +0.0
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.0 -0.7 -0.1 -2.8 -0.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.0 -0.8 -0.5 -2.4 -0.0
no stress control Defined media control, aerobic -0.3 -0.5 -0.3 -2.1 -0.4
carbon source Ying_sugar7 rep A; time point 2 -0.1 -4.1 +0.4 +0.4 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -2.4 -1.0 +0.1 -0.0
no stress control Defined media control, anaerobic -0.2 -0.1 -0.3 -2.5 -0.4
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -1.2 -0.9 -0.6 -0.9
carbon source Ying_sugar7 rep C; time point 2 -0.0 -3.7 +0.2 -0.2 +0.3
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 -0.3 +0.0 -2.6 -0.5
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 -0.7 -0.2 -2.3 -0.0
carbon source Ying_sugar7 rep B; time point 3 +0.2 -3.9 +0.2 +0.4 -0.2
carbon source Ying_sugar7 rep C; time point 1 +0.1 -2.9 +0.2 -0.6 +0.0
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.9 -1.1 -1.7 +0.4
carbon source Ying_sugar7 rep B; time point 2 +0.1 -4.3 +0.3 +1.0 -0.0
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.0 -1.3 -1.6 +0.3 -0.5
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -1.2 -1.3 +0.3 -0.4
carbon source Ying_all64 rep C; time point 3 +0.2 -3.1 -0.1 +0.2 -0.1
carbon source Ying_all64 rep A; time point 3 +0.1 -3.0 -0.0 +0.2 +0.1
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -1.3 -0.9 +0.9 -0.4
carbon source Ying_sugar7 rep B; time point 1 +0.0 -2.8 +0.3 +0.9 +0.0
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 -1.1 -1.1 +1.3 +0.4
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -1.2 -0.5 +1.2 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 -0.7 -0.3 +1.9 -0.0
remove
IAI47_18700
plot		 remove
IAI47_18705
plot		 remove
IAI47_18710		 remove
IAI47_18715
plot		 remove
IAI47_18720
plot