Fitness for 5 genes in Pantoea sp. MT58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 309 experiments or choose conditions or try the comparative fitness browser

500 ntIAI47_18685 and IAI47_18690 are separated by 736 nucleotidesIAI47_18690 and IAI47_18695 are separated by 226 nucleotidesIAI47_18695 and IAI47_18700 are separated by 432 nucleotidesIAI47_18700 and IAI47_18705 are separated by 95 nucleotides IAI47_18685: IAI47_18685 - HTH-type transcriptional regulator, at 3,984,705 to 3,985,001 _18685 IAI47_18690: IAI47_18690 - gamma-glutamyltransferase family protein, at 3,985,738 to 3,987,336 _18690 IAI47_18695: IAI47_18695 - DUF3053 domain-containing protein, at 3,987,563 to 3,988,279 _18695 IAI47_18700: IAI47_18700 - PTS mannitol transporter subunit IICBA, at 3,988,712 to 3,990,646 _18700 IAI47_18705: IAI47_18705 - mannitol-1-phosphate 5-dehydrogenase, at 3,990,742 to 3,991,890 _18705
Group Condition IAI47_18685 IAI47_18690 IAI47_18695 IAI47_18700 IAI47_18705
carbon source Ying_sugar7 rep B; time point 2 -0.0 -0.1 +0.1 +0.1 -4.3
carbon source Ying_sugar7 rep A; time point 2 +0.2 -0.0 -0.0 -0.1 -4.1
carbon source Ying_sugar7 rep A; time point 3 +0.2 +0.1 -0.2 +0.1 -4.3
carbon source Ying_sugar7 rep C; time point 3 +0.0 +0.1 -0.1 +0.1 -4.1
carbon source Ying_sugar7 rep B; time point 3 +0.1 +0.1 -0.1 +0.2 -3.9
carbon source Ying_sugar7 rep C; time point 2 -0.0 -0.1 +0.3 -0.0 -3.7
carbon source Ying_all64 rep A; time point 3 -0.2 +0.2 -0.1 +0.1 -3.0
carbon source Ying_all64 rep C; time point 3 +0.1 -0.1 -0.2 +0.2 -3.1
carbon source Ying_sugar7 rep C; time point 1 +0.0 -0.1 +0.1 +0.1 -2.9
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 +0.0 -0.2 -0.1 -2.4
carbon source Ying_sugar7 rep B; time point 1 -0.2 -0.0 +0.3 +0.0 -2.8
carbon source Ying_all64 rep B; time point 3 +0.2 +0.2 +0.0 +0.1 -3.2
carbon source Ying_all64 rep B; time point 2 +0.0 -0.1 +0.3 -0.0 -2.7
carbon source Ying_all64 rep A; time point 2 -0.1 +0.1 +0.1 -0.0 -2.4
carbon source Ying_sugar7 rep A; time point 1 -0.1 +0.0 +0.2 +0.1 -2.5
carbon source Ying_all64 rep C; time point 2 -0.1 -0.1 +0.0 +0.1 -2.1
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -0.2 -0.0 +0.0 -1.7
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -0.3 -0.2 -0.0 -1.3
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.3 -0.5 +0.1 -1.4
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 +0.2 +0.2 -0.2 -1.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.3 +0.3 +0.2 -1.4
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 +0.4 -0.1 +0.4 -1.0
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 +0.6 +0.5 +0.3 -1.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.5 +0.5 +0.2 +0.3 -1.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.5 +0.4 +0.4 -0.9
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.5 +0.4 +0.2 +0.4 -0.8
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 +0.3 +0.3 +0.5 -0.7
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 +0.1 +0.5 +0.4 -0.6
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.4 +0.4 +0.5 +0.6 -1.1
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.4 +0.4 +0.7 +0.5 -0.9
remove
IAI47_18685
plot		 remove
IAI47_18690
plot		 remove
IAI47_18695		 remove
IAI47_18700
plot		 remove
IAI47_18705
plot