Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_18670 and IAI47_18675 are separated by 95 nucleotidesIAI47_18675 and IAI47_18680 are separated by 62 nucleotidesIAI47_18680 and IAI47_18685 are separated by 38 nucleotidesIAI47_18685 and IAI47_18690 are separated by 736 nucleotides IAI47_18670: IAI47_18670 - organic hydroperoxide resistance protein, at 3,983,019 to 3,983,447 _18670 IAI47_18675: IAI47_18675 - MarR family transcriptional regulator, at 3,983,543 to 3,984,007 _18675 IAI47_18680: IAI47_18680 - HD domain-containing protein, at 3,984,070 to 3,984,666 _18680 IAI47_18685: IAI47_18685 - HTH-type transcriptional regulator, at 3,984,705 to 3,985,001 _18685 IAI47_18690: IAI47_18690 - gamma-glutamyltransferase family protein, at 3,985,738 to 3,987,336 _18690
Group Condition IAI47_18670 IAI47_18675 IAI47_18680 IAI47_18685 IAI47_18690
stress copper (II) chloride 2 uM, anaerobic -0.2 -1.2 -0.0 -0.2 -0.5
no stress control Defined media control, aerobic -0.2 -0.7 -0.4 -0.6 -0.1
carbon source Ying_sugar7 rep B; time point 3 -0.2 -2.0 +0.1 +0.1 +0.1
no stress control Defined media control, anaerobic -0.4 -0.7 -0.1 -0.6 -0.1
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -1.1 -0.1 -0.3 -0.2
carbon source Ying_sugar7 rep C; time point 3 +0.0 -1.9 -0.0 +0.0 +0.1
no stress control Defined media control, anaerobic -0.2 -0.7 -0.2 -0.3 -0.3
nitrogen source nitrogen source Ammonium chloride 20mM -0.2 -0.7 -0.3 -0.2 -0.3
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.5 -0.8 +0.0 -0.1 -0.4
stress Uranyl Acetate Dihydrate 200 uM, anaerobic -0.4 -0.9 -0.1 -0.2 -0.1
no stress control Defined media control, anaerobic -0.6 -0.7 -0.1 +0.0 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 -1.1 -0.0 +0.2 -0.2
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 -1.0 +0.1 -0.1 -0.4
carbon source Ying_sugar7 rep B; time point 2 -0.4 -1.0 +0.2 -0.0 -0.1
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.7 -0.7 +0.2 -0.2 -0.0
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -1.0 +0.2 -0.4 +0.1
carbon source Ying_sugar7 rep A; time point 3 -0.4 -1.1 -0.0 +0.2 +0.1
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -0.9 -0.2 +0.1 +0.3
carbon source Ying_all64 rep B; time point 3 +0.0 -1.2 +0.1 +0.2 +0.2
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -1.1 +0.2 +0.1 -0.1
stress copper (II) chloride 2 uM, anaerobic +0.4 -0.8 +0.3 +0.2 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 -0.4 +0.5 +0.4 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -0.4 +0.5 +0.4 +0.3
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.5 +0.5 +0.3 +0.4
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 -0.4 +0.4 -0.0 +0.6
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -0.3 +0.6 +0.2 +0.5
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.3 -0.6 +0.4 +0.2 +0.5
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.2 +0.7 -0.1 +0.6
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.5 -0.5 +0.3 +0.5 +0.5
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.6 -0.7 +0.5 +0.5 +0.4
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