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Protein
Homologs
Fitness for 5 genes in
Pantoea sp. MT58
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
IAI47_18670 and IAI47_18675 are separated by 95 nucleotides
IAI47_18675 and IAI47_18680 are separated by 62 nucleotides
IAI47_18680 and IAI47_18685 are separated by 38 nucleotides
IAI47_18685 and IAI47_18690 are separated by 736 nucleotides
IAI47_18670: IAI47_18670 - organic hydroperoxide resistance protein, at 3,983,019 to 3,983,447
_18670
IAI47_18675: IAI47_18675 - MarR family transcriptional regulator, at 3,983,543 to 3,984,007
_18675
IAI47_18680: IAI47_18680 - HD domain-containing protein, at 3,984,070 to 3,984,666
_18680
IAI47_18685: IAI47_18685 - HTH-type transcriptional regulator, at 3,984,705 to 3,985,001
_18685
IAI47_18690: IAI47_18690 - gamma-glutamyltransferase family protein, at 3,985,738 to 3,987,336
_18690
Group
Condition
IAI47
_18670
IAI47
_18675
IAI47
_18680
IAI47
_18685
IAI47
_18690
stress
copper (II) chloride 2 uM, anaerobic
-0.2
-1.2
-0.0
-0.2
-0.5
no stress control
Defined media control, aerobic
-0.2
-0.7
-0.4
-0.6
-0.1
carbon source
Ying_sugar7 rep B; time point 3
-0.2
-2.0
+0.1
+0.1
+0.1
no stress control
Defined media control, anaerobic
-0.4
-0.7
-0.1
-0.6
-0.1
survival
Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.1
-1.1
-0.1
-0.3
-0.2
carbon source
Ying_sugar7 rep C; time point 3
+0.0
-1.9
-0.0
+0.0
+0.1
no stress control
Defined media control, anaerobic
-0.2
-0.7
-0.2
-0.3
-0.3
nitrogen source
nitrogen source Ammonium chloride 20mM
-0.2
-0.7
-0.3
-0.2
-0.3
survival
Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-0.5
-0.8
+0.0
-0.1
-0.4
stress
Uranyl Acetate Dihydrate 200 uM, anaerobic
-0.4
-0.9
-0.1
-0.2
-0.1
no stress control
Defined media control, anaerobic
-0.6
-0.7
-0.1
+0.0
-0.2
survival
Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.3
-1.1
-0.0
+0.2
-0.2
survival
Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-0.2
-1.0
+0.1
-0.1
-0.4
carbon source
Ying_sugar7 rep B; time point 2
-0.4
-1.0
+0.2
-0.0
-0.1
survival
Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.7
-0.7
+0.2
-0.2
-0.0
survival
Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.1
-1.0
+0.2
-0.4
+0.1
carbon source
Ying_sugar7 rep A; time point 3
-0.4
-1.1
-0.0
+0.2
+0.1
survival
Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.2
-0.9
-0.2
+0.1
+0.3
carbon source
Ying_all64 rep B; time point 3
+0.0
-1.2
+0.1
+0.2
+0.2
survival
Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.1
-1.1
+0.2
+0.1
-0.1
stress
copper (II) chloride 2 uM, anaerobic
+0.4
-0.8
+0.3
+0.2
-0.2
survival
Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.4
-0.4
+0.5
+0.4
+0.1
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.1
-0.4
+0.5
+0.4
+0.3
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.1
-0.5
+0.5
+0.3
+0.4
survival
Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.3
-0.4
+0.4
-0.0
+0.6
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.1
-0.3
+0.6
+0.2
+0.5
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
+0.3
-0.6
+0.4
+0.2
+0.5
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.2
-0.2
+0.7
-0.1
+0.6
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.5
-0.5
+0.3
+0.5
+0.5
survival
Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.6
-0.7
+0.5
+0.5
+0.4
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