Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_18660 and IAI47_18665 are separated by 125 nucleotidesIAI47_18665 and IAI47_18670 are separated by 318 nucleotidesIAI47_18670 and IAI47_18675 are separated by 95 nucleotidesIAI47_18675 and IAI47_18680 are separated by 62 nucleotides IAI47_18660: IAI47_18660 - tRNA-Pro, at 3,980,807 to 3,980,883 _18660 IAI47_18665: IAI47_18665 - kdo(2)-lipid A phosphoethanolamine 7''-transferase, at 3,981,009 to 3,982,700 _18665 IAI47_18670: IAI47_18670 - organic hydroperoxide resistance protein, at 3,983,019 to 3,983,447 _18670 IAI47_18675: IAI47_18675 - MarR family transcriptional regulator, at 3,983,543 to 3,984,007 _18675 IAI47_18680: IAI47_18680 - HD domain-containing protein, at 3,984,070 to 3,984,666 _18680
Group Condition IAI47_18660 IAI47_18665 IAI47_18670 IAI47_18675 IAI47_18680
carbon source Ying_sugar7 rep B; time point 3 N.D. -0.0 -0.2 -2.0 +0.1
carbon source Ying_sugar7 rep C; time point 3 N.D. +0.0 +0.0 -1.9 -0.0
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -0.4 -0.2 -1.1 +0.0
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -0.0 -0.3 -1.1 -0.0
carbon source Ying_sugar7 rep A; time point 3 N.D. -0.0 -0.4 -1.1 -0.0
stress Uranyl Acetate Dihydrate 200 uM, anaerobic N.D. -0.1 -0.4 -0.9 -0.1
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. -0.1 -0.4 -0.8 -0.2
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. -0.2 -0.5 -0.8 +0.0
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -0.1 -0.1 -1.1 -0.1
nitrogen source nitrogen source nitrite 1mM N.D. -0.2 -0.5 -0.6 -0.2
no stress control Defined media control, anaerobic N.D. -0.0 -0.6 -0.7 -0.1
nitrogen source nitrogen source nitrate 5mM N.D. -0.2 -0.3 -0.6 -0.3
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -0.2 -0.3 -0.9 -0.0
no stress control Defined media control, aerobic N.D. -0.2 -0.2 -0.7 -0.4
stress copper (II) chloride 2 uM, anaerobic N.D. -0.1 -0.2 -1.2 -0.0
carbon source Ying_sugar7 rep C; time point 2 N.D. +0.1 -0.3 -0.9 -0.1
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. +0.1 -0.2 -1.0 -0.1
carbon source Ying_sugar7 rep B; time point 2 N.D. +0.1 -0.4 -1.0 +0.2
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. -0.1 -0.2 -1.0 +0.1
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. +0.1 -0.7 -0.7 +0.2
carbon source Ying_all64 rep B; time point 3 N.D. +0.1 +0.0 -1.2 +0.1
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -0.1 +0.1 -1.1 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50 N.D. +0.0 -0.4 -0.8 +0.3
stress copper (II) chloride 2 uM, anaerobic N.D. -0.3 +0.4 -0.8 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. +0.2 -0.4 -0.4 +0.5
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. +0.2 +0.5 -0.5 +0.3
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. +0.4 +0.1 -0.5 +0.5
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. +0.1 +0.6 -0.7 +0.5
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. +0.3 +0.3 -0.4 +0.4
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. +0.3 +0.2 -0.2 +0.7
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IAI47_18665
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