Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_18515 and IAI47_18520 are separated by 30 nucleotidesIAI47_18520 and IAI47_18525 are separated by 280 nucleotidesIAI47_18525 and IAI47_18530 are separated by 351 nucleotidesIAI47_18530 and IAI47_18535 are separated by 117 nucleotides IAI47_18515: IAI47_18515 - ECA polysaccharide chain length modulation protein, at 3,938,543 to 3,939,592 _18515 IAI47_18520: IAI47_18520 - UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase, at 3,939,623 to 3,940,702 _18520 IAI47_18525: IAI47_18525 - transcription termination factor Rho, at 3,940,983 to 3,942,242 _18525 IAI47_18530: IAI47_18530 - thioredoxin TrxA, at 3,942,594 to 3,942,926 _18530 IAI47_18535: IAI47_18535 - ATP-dependent RNA helicase RhlB, at 3,943,044 to 3,944,336 _18535
Group Condition IAI47_18515 IAI47_18520 IAI47_18525 IAI47_18530 IAI47_18535
stress Uranyl Acetate Dihydrate 200 uM, aerobic +0.3 -0.7 N.D. -6.0 -0.6
carbon source Ying_sugar7 rep A; time point 3 -0.3 -0.4 N.D. -4.9 -1.1
nitrogen source nitrogen source nitrate 5mM -0.4 -1.2 N.D. -4.2 -0.9
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -1.7 N.D. -4.4 -0.4
carbon source Ying_sugar7 rep B; time point 3 -0.3 -0.3 N.D. -4.8 -1.2
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.9 -5.3 N.D. -0.4 +0.0
carbon source Ying_sugar7 rep C; time point 3 -0.3 -0.2 N.D. -4.9 -1.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 -1.6 N.D. -4.5 -0.2
nitrogen source nitrogen source Ammonium chloride 20mM -0.3 -0.6 N.D. -4.5 -0.8
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 -4.4 N.D. -1.1 +0.0
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 -3.8 N.D. -1.8 +0.1
nitrogen source nitrogen source nitrate 20mM -0.0 +0.1 N.D. -4.8 -1.1
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.7 -5.1 N.D. -0.1 +0.1
carbon source Ying_sugar7 rep A; time point 2 -0.3 -0.2 N.D. -4.5 -0.8
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 -4.9 N.D. -0.4 +0.0
stress Cadmium acetate 8 uM, aerobic -0.2 -0.9 N.D. -3.9 -0.5
nitrogen source nitrogen source Ammonium chloride 20mM -0.2 +0.5 N.D. -4.9 -0.9
carbon source Ying_Nucleobase14 rep C; time point 3 -0.1 +0.4 N.D. -4.8 -0.9
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 -2.3 N.D. -2.4 -0.4
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 -4.0 N.D. -0.7 -0.2
no stress control Defined media control, aerobic +0.3 -0.8 N.D. -4.0 -0.8
nitrogen source nitrogen source nitrite 1mM -0.3 +1.0 N.D. -4.5 -1.3
stress Manganese (II) chloride tetrahydrate 50 uM, aerobic +0.4 -0.7 N.D. -4.1 -0.7
carbon source Ying_sugar7 rep C; time point 2 -0.3 +0.7 N.D. -4.0 -1.4
carbon source Ying_Nucleobase14 rep B; time point 2 -0.2 +0.3 N.D. -4.5 -0.5
carbon source Ying_OrganicAcid7 rep C; time point 3 +0.0 +0.8 N.D. -4.8 -0.9
carbon source Ying_OrganicAcid7 rep C; time point 2 -0.1 +0.8 N.D. -4.5 -0.5
carbon source Ying_OrganicAcid7 rep B; time point 2 -0.0 +1.1 N.D. -4.6 -0.6
nitrogen source nitrogen source nitrite 1mM -0.3 +1.3 N.D. -3.9 -1.1
carbon source Ying_OrganicAcid7 rep A; time point 3 -0.1 +1.2 N.D. -3.8 -0.7
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