Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_18420 and IAI47_18425 are separated by 316 nucleotidesIAI47_18425 and IAI47_18430 overlap by 4 nucleotidesIAI47_18430 and IAI47_18435 are separated by 25 nucleotidesIAI47_18435 and IAI47_18440 are separated by 2 nucleotides IAI47_18420: IAI47_18420 - class I adenylate cyclase, at 3,919,562 to 3,922,120 _18420 IAI47_18425: IAI47_18425 - hydroxymethylbilane synthase, at 3,922,437 to 3,923,378 _18425 IAI47_18430: IAI47_18430 - uroporphyrinogen-III synthase, at 3,923,375 to 3,924,103 _18430 IAI47_18435: IAI47_18435 - uroporphyrinogen-III C-methyltransferase, at 3,924,129 to 3,925,262 _18435 IAI47_18440: IAI47_18440 - protoheme IX biogenesis protein HemY, at 3,925,265 to 3,926,461 _18440
Group Condition IAI47_18420 IAI47_18425 IAI47_18430 IAI47_18435 IAI47_18440
carbon source Ying_AminoAcid20 rep B; time point 3 -2.6 N.D. N.D. -0.5 -0.2
carbon source Ying_AminoAcid20 rep C; time point 3 -2.2 N.D. N.D. -0.5 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -2.4 N.D. N.D. -0.1 -0.2
carbon source Ying_AminoAcid20 rep A; time point 3 -2.0 N.D. N.D. -0.4 -0.2
carbon source Ying_AminoAcid20 rep A; time point 2 -2.0 N.D. N.D. -0.2 -0.3
no stress control Defined media control, aerobic -0.7 N.D. N.D. -0.9 -0.8
carbon source Ying_AminoAcid20 rep B; time point 2 -1.9 N.D. N.D. -0.2 -0.1
stress Aluminum potassium sulfate dodecahydrate 1 mM, aerobic -0.6 N.D. N.D. -0.8 -0.8
stress Manganese (II) chloride tetrahydrate 50 uM, aerobic -0.5 N.D. N.D. -1.1 -0.7
stress Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic -0.2 N.D. N.D. -1.3 -0.6
stress Aluminum potassium sulfate dodecahydrate 1 mM, aerobic -0.5 N.D. N.D. -0.9 -0.7
carbon source Ying_AminoAcid20 rep C; time point 2 -2.0 N.D. N.D. -0.2 -0.0
no stress control Defined media control, anaerobic -0.1 N.D. N.D. -1.4 -0.6
stress Manganese (II) chloride tetrahydrate 50 uM, aerobic -0.6 N.D. N.D. -0.8 -0.6
stress Manganese (II) chloride tetrahydrate 50 uM, anaerobic -0.1 N.D. N.D. -1.4 -0.6
stress Aluminum potassium sulfate dodecahydrate 1 mM, aerobic -0.6 N.D. N.D. -1.0 -0.4
stress Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic -0.2 N.D. N.D. -1.0 -0.8
stress Manganese (II) chloride tetrahydrate 50 uM, anaerobic -0.1 N.D. N.D. -1.1 -0.8
stress Uranyl Acetate Dihydrate 200 uM, anaerobic +0.0 N.D. N.D. -1.2 -0.7
stress Uranyl Acetate Dihydrate 200 uM, aerobic -0.5 N.D. N.D. -1.0 -0.4
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.3 N.D. N.D. -0.2 +0.6
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.4 N.D. N.D. +0.0 +0.5
stress copper (II) chloride 2 uM, anaerobic +0.7 N.D. N.D. -0.6 -0.8
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.4 N.D. N.D. +0.5 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -2.0 N.D. N.D. +1.0 +0.5
stress copper (II) chloride 2 uM, anaerobic +1.0 N.D. N.D. -0.6 -0.6
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.1 N.D. N.D. +0.9 +0.2
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.0 N.D. N.D. +0.9 +0.5
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.7 N.D. N.D. +0.7 +0.7
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +1.2 N.D. N.D. +0.3 -0.5
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