Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_18400 and IAI47_18405 overlap by 4 nucleotidesIAI47_18405 and IAI47_18410 overlap by 4 nucleotidesIAI47_18410 and IAI47_18415 are separated by 28 nucleotidesIAI47_18415 and IAI47_18420 are separated by 147 nucleotides IAI47_18400: IAI47_18400 - tyrosine recombinase XerC, at 3,916,758 to 3,917,663 _18400 IAI47_18405: IAI47_18405 - DUF484 domain-containing protein, at 3,917,660 to 3,918,364 _18405 IAI47_18410: IAI47_18410 - diaminopimelate epimerase, at 3,918,361 to 3,919,185 _18410 IAI47_18415: IAI47_18415 - lipoprotein, at 3,919,214 to 3,919,414 _18415 IAI47_18420: IAI47_18420 - class I adenylate cyclase, at 3,919,562 to 3,922,120 _18420
Group Condition IAI47_18400 IAI47_18405 IAI47_18410 IAI47_18415 IAI47_18420
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -4.0 -0.6 -1.7 -1.8 -2.4
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -2.7 -0.4 -1.9 -4.7 -0.7
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -3.4 -0.7 -1.1 -3.4 -0.6
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -3.5 -0.5 -0.8 -3.9 -0.4
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -2.6 -0.7 -1.4 -3.7 -0.2
carbon source Ying_AminoAcid20 rep B; time point 3 -2.8 -1.6 -1.0 -0.6 -2.6
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -2.4 -1.0 -1.1 -3.7 -0.3
carbon source Ying_AminoAcid20 rep C; time point 3 -2.8 -1.5 -1.0 -0.4 -2.2
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -3.9 -1.2 -1.3 -0.4 -0.8
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.5 -0.3 -1.6 -3.6 -0.5
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -2.5 -0.5 -1.4 -0.8 -2.0
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -2.6 -0.6 -1.0 -2.4 -0.4
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -3.0 -0.3 -1.2 -2.3 -0.3
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -2.2 -1.5 -1.2 -1.1 -0.9
carbon source Ying_AminoAcid20 rep A; time point 3 -2.3 -1.6 -0.6 -0.3 -2.0
carbon source Ying_sugar7 rep A; time point 3 -2.8 -1.3 -1.7 -1.1 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -3.9 -0.5 -0.9 -0.2 -1.1
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -3.2 -0.4 -0.6 -1.4 -1.0
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50 -2.4 +0.3 -1.1 -1.8 -1.3
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 -3.5 -0.2 -1.8 -1.2 +0.4
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -4.0 -0.2 -0.6 +0.3 -1.2
carbon source Ying_Others16 rep A; time point 3 -1.6 -1.6 -2.5 -0.2 +0.3
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -3.2 -0.5 -1.5 +0.5 -0.9
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -3.6 -0.4 -0.9 +0.4 -0.9
carbon source Ying_Others16 rep C; time point 3 -1.6 -1.6 -2.4 -0.3 +0.5
carbon source Ying_sugar7 rep B; time point 3 -2.6 -0.7 -1.8 -0.8 +0.5
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -2.9 -1.0 -0.2 -2.2 +1.0
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -3.3 -0.4 -0.6 -1.3 +0.8
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -2.3 -0.2 +0.1 -2.9 +1.4
stress dichromate 5 uM, aerobic -2.5 -0.6 -1.4 +1.3 -0.6
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