Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_18255 and IAI47_18260 are separated by 94 nucleotidesIAI47_18260 and IAI47_18265 overlap by 1 nucleotidesIAI47_18265 and IAI47_18270 are separated by 3 nucleotidesIAI47_18270 and IAI47_18275 are separated by 109 nucleotides IAI47_18255: IAI47_18255 - 3'-5' ssDNA/RNA exonuclease TatD, at 3,885,172 to 3,885,954 _18255 IAI47_18260: IAI47_18260 - Sec-independent protein translocase subunit TatC, at 3,886,049 to 3,886,807 _18260 IAI47_18265: IAI47_18265 - Sec-independent protein translocase subunit TatB, at 3,886,807 to 3,887,508 _18265 IAI47_18270: IAI47_18270 - twin-arginine translocase TatA/TatE family subunit, at 3,887,512 to 3,887,766 _18270 IAI47_18275: IAI47_18275 - ubiquinone biosynthesis regulatory protein kinase UbiB, at 3,887,876 to 3,889,513 _18275
Group Condition IAI47_18255 IAI47_18260 IAI47_18265 IAI47_18270 IAI47_18275
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 N.D. -5.5 -0.7 N.D.
stress Nickel (II) chloride 40 uM, aerobic -0.1 N.D. -2.0 -2.9 N.D.
stress copper (II) chloride 5 uM, aerobic -0.3 N.D. -2.0 -2.1 N.D.
stress copper (II) chloride 2 uM, anaerobic -0.1 N.D. -2.1 -2.1 N.D.
stress copper (II) chloride 5 uM, aerobic -0.0 N.D. -2.3 -1.2 N.D.
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 N.D. -2.4 -0.8 N.D.
no stress control Defined media control, aerobic -0.2 N.D. -2.3 -0.3 N.D.
stress Nickel (II) chloride 40 uM, aerobic -0.2 N.D. -0.6 -1.8 N.D.
stress copper (II) chloride 2 uM, anaerobic +0.1 N.D. -1.4 -1.3 N.D.
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 N.D. -2.0 +0.0 N.D.
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 N.D. -2.7 +0.6 N.D.
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.3 N.D. -1.5 -0.2 N.D.
stress Nickel (II) chloride 40 uM, aerobic -0.2 N.D. +0.4 -2.3 N.D.
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 N.D. -1.3 -0.8 N.D.
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 N.D. -1.4 -0.4 N.D.
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 N.D. -1.2 -0.4 N.D.
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 N.D. -1.7 -0.3 N.D.
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.3 N.D. -1.7 -0.2 N.D.
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.3 N.D. -1.1 +0.8 N.D.
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 N.D. +0.9 -1.1 N.D.
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 N.D. -0.9 +0.8 N.D.
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 N.D. +1.3 -0.4 N.D.
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 N.D. +0.6 +1.2 N.D.
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50 -0.1 N.D. +1.5 +0.6 N.D.
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 N.D. +0.8 +1.3 N.D.
nitrogen source nitrogen source nitrite 0.5mM +0.0 N.D. +1.7 +0.3 N.D.
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 N.D. +1.8 +0.3 N.D.
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 N.D. +1.6 +1.0 N.D.
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 N.D. +1.9 +1.0 N.D.
carbon source Ying_sugar7 rep A; time point 1 +0.2 N.D. +1.6 +0.8 N.D.
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