Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_18045 and IAI47_18050 are separated by 32 nucleotidesIAI47_18050 and IAI47_18055 are separated by 69 nucleotidesIAI47_18055 and IAI47_18060 are separated by 188 nucleotidesIAI47_18060 and IAI47_18065 are separated by 63 nucleotides IAI47_18045: IAI47_18045 - phosphoribosylamine--glycine ligase, at 3,839,540 to 3,840,820 _18045 IAI47_18050: IAI47_18050 - DUF1481 domain-containing protein, at 3,840,853 to 3,841,515 _18050 IAI47_18055: IAI47_18055 - DNA-binding protein HU-alpha, at 3,841,585 to 3,841,857 _18055 IAI47_18060: IAI47_18060 - YjaG family protein, at 3,842,046 to 3,842,636 _18060 IAI47_18065: IAI47_18065 - deoxyribonuclease V, at 3,842,700 to 3,843,368 _18065
Group Condition IAI47_18045 IAI47_18050 IAI47_18055 IAI47_18060 IAI47_18065
stress Cadmium acetate 8 uM, aerobic -4.3 -0.1 -1.1 -0.5 -0.1
carbon source Ying_sugar7 rep B; time point 2 -4.8 +0.0 -0.2 -0.6 -0.3
carbon source Ying_sugar7 rep B; time point 3 -4.5 -0.1 -0.7 -0.8 +0.2
nitrogen source nitrogen source Ammonium chloride 20mM -4.1 +0.1 -2.0 -0.1 +0.2
carbon source Ying_sugar7 rep C; time point 3 -4.6 +0.1 -0.5 -0.9 +0.1
stress dichromate 5 uM, aerobic -4.0 +0.1 -0.9 -1.0 -0.0
carbon source Ying_sugar7 rep A; time point 3 -4.5 +0.0 -0.4 -0.8 -0.1
stress copper (II) chloride 5 uM, aerobic -4.4 -0.1 -0.8 -0.5 +0.1
no stress control Defined media control, aerobic -3.7 -0.2 -1.2 -0.8 +0.3
stress Aluminum potassium sulfate dodecahydrate 1 mM, aerobic -4.5 -0.0 -0.4 -0.7 +0.1
stress Aluminum potassium sulfate dodecahydrate 1 mM, aerobic -4.4 -0.1 -0.5 -0.7 +0.3
stress dichromate 5 uM, aerobic -4.1 +0.0 -0.5 -0.8 +0.1
stress Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic -3.7 -0.3 -1.2 -0.4 +0.3
carbon source Ying_sugar7 rep A; time point 2 -4.9 +0.1 -0.3 -0.4 +0.2
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 -0.4 -4.5 -0.5 -0.1
no stress control Defined media control, aerobic -3.4 -0.1 -1.2 -0.9 +0.5
carbon source Ying_Others16 rep C; time point 3 -4.4 +0.1 +0.2 -0.8 -0.1
stress Uranyl Acetate Dihydrate 200 uM, aerobic -3.8 -0.1 -0.8 -0.6 +0.3
carbon source Ying_OrganicAcid7 rep C; time point 3 -4.4 +0.1 +0.5 -0.7 -0.2
nitrogen source nitrogen source nitrite 1mM -2.7 +0.2 -2.2 -0.4 +0.3
carbon source Ying_Others16 rep A; time point 3 -4.4 +0.0 +0.5 -0.7 +0.1
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.0 -4.8 -0.2 +0.5
nitrogen source Ammonium chloride (N) -4.6 +0.2 +0.8 -0.1 -0.5
carbon source Ying_AminoAcid20 rep A; time point 2 -4.6 +0.1 +0.6 -0.3 +0.1
carbon source Ying_OrganicAcid7 rep A; time point 3 -4.3 +0.2 +0.6 -0.5 +0.1
carbon source Ying_AminoAcid20 rep C; time point 2 -4.6 +0.2 +0.7 -0.4 +0.2
carbon source Ying_AminoAcid20 rep B; time point 3 -4.5 +0.1 +1.4 -0.6 -0.0
carbon source Ying_Others16 rep C; time point 2 -4.3 +0.2 +0.7 -0.5 +0.3
carbon source Ying_AminoAcid20 rep A; time point 3 -4.5 +0.3 +1.3 -0.8 +0.2
carbon source Ying_AminoAcid20 rep C; time point 3 -4.5 +0.2 +1.5 -0.7 +0.2
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