Fitness for 5 genes in Pantoea sp. MT58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 309 experiments or choose conditions or try the comparative fitness browser

500 ntIAI47_18040 and IAI47_18045 are separated by 19 nucleotidesIAI47_18045 and IAI47_18050 are separated by 32 nucleotidesIAI47_18050 and IAI47_18055 are separated by 69 nucleotidesIAI47_18055 and IAI47_18060 are separated by 188 nucleotides IAI47_18040: IAI47_18040 - bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase, at 3,837,931 to 3,839,520 _18040 IAI47_18045: IAI47_18045 - phosphoribosylamine--glycine ligase, at 3,839,540 to 3,840,820 _18045 IAI47_18050: IAI47_18050 - DUF1481 domain-containing protein, at 3,840,853 to 3,841,515 _18050 IAI47_18055: IAI47_18055 - DNA-binding protein HU-alpha, at 3,841,585 to 3,841,857 _18055 IAI47_18060: IAI47_18060 - YjaG family protein, at 3,842,046 to 3,842,636 _18060
Group Condition IAI47_18040 IAI47_18045 IAI47_18050 IAI47_18055 IAI47_18060
stress Cadmium acetate 8 uM, aerobic -5.3 -4.3 -0.1 -1.1 -0.5
carbon source Ying_sugar7 rep B; time point 3 -4.4 -4.5 -0.1 -0.7 -0.8
stress copper (II) chloride 5 uM, aerobic -4.7 -4.4 -0.1 -0.8 -0.5
carbon source Ying_sugar7 rep C; time point 3 -4.5 -4.6 +0.1 -0.5 -0.9
no stress control Defined media control, aerobic -4.5 -3.7 -0.2 -1.2 -0.8
stress Aluminum potassium sulfate dodecahydrate 1 mM, aerobic -4.6 -4.4 -0.1 -0.5 -0.7
stress Aluminum potassium sulfate dodecahydrate 1 mM, aerobic -5.1 -4.3 -0.0 -0.4 -0.5
stress Aluminum potassium sulfate dodecahydrate 1 mM, aerobic -4.7 -4.5 -0.0 -0.4 -0.7
nitrogen source nitrogen source Ammonium chloride 20mM -4.1 -4.1 +0.1 -2.0 -0.1
stress dichromate 5 uM, aerobic -4.4 -4.0 +0.1 -0.9 -1.0
no stress control Defined media control, aerobic -4.6 -3.4 -0.1 -1.2 -0.9
carbon source Ying_sugar7 rep B; time point 2 -4.5 -4.8 +0.0 -0.2 -0.6
carbon source Ying_sugar7 rep A; time point 2 -4.6 -4.9 +0.1 -0.3 -0.4
no stress control Defined media control, aerobic -4.6 -4.7 -0.0 -0.4 -0.3
carbon source Ying_sugar7 rep A; time point 3 -4.4 -4.5 +0.0 -0.4 -0.8
stress Nickel (II) chloride 40 uM, aerobic -4.9 -4.2 -0.1 -0.5 -0.2
stress Uranyl Acetate Dihydrate 200 uM, aerobic -4.5 -3.8 -0.1 -0.8 -0.6
no stress control Defined media control, aerobic -4.8 -4.3 +0.0 -0.3 -0.5
stress Cobalt chloride 10 uM, aerobic -4.8 -4.1 +0.1 -0.6 -0.3
carbon source Ying_Others16 rep C; time point 3 -4.4 -4.4 +0.1 +0.2 -0.8
carbon source Ying_OrganicAcid7 rep C; time point 3 -4.3 -4.4 +0.1 +0.5 -0.7
carbon source Ying_Others16 rep A; time point 3 -4.3 -4.4 +0.0 +0.5 -0.7
carbon source Ying_AminoAcid20 rep A; time point 2 -4.4 -4.6 +0.1 +0.6 -0.3
carbon source Ying_AminoAcid20 rep C; time point 2 -4.5 -4.6 +0.2 +0.7 -0.4
carbon source Ying_OrganicAcid7 rep A; time point 3 -4.2 -4.3 +0.2 +0.6 -0.5
carbon source Ying_AminoAcid20 rep B; time point 2 -4.4 -4.5 +0.2 +0.6 -0.2
carbon source Ying_Others16 rep C; time point 2 -4.3 -4.3 +0.2 +0.7 -0.5
carbon source Ying_AminoAcid20 rep B; time point 3 -4.4 -4.5 +0.1 +1.4 -0.6
carbon source Ying_AminoAcid20 rep A; time point 3 -4.4 -4.5 +0.3 +1.3 -0.8
carbon source Ying_AminoAcid20 rep C; time point 3 -4.5 -4.5 +0.2 +1.5 -0.7
remove
IAI47_18040
plot
remove
IAI47_18045
plot
remove
IAI47_18050
remove
IAI47_18055
plot
remove
IAI47_18060
plot