Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_17995 and IAI47_18000 overlap by 26 nucleotidesIAI47_18000 and IAI47_18005 are separated by 62 nucleotidesIAI47_18005 and IAI47_18010 are separated by 17 nucleotidesIAI47_18010 and IAI47_18015 are separated by 262 nucleotides IAI47_17995: IAI47_17995 - glyoxylate bypass operon transcriptional repressor IclR, at 3,825,329 to 3,826,156 _17995 IAI47_18000: IAI47_18000 - bifunctional isocitrate dehydrogenase kinase/phosphatase, at 3,826,131 to 3,827,879 _18000 IAI47_18005: IAI47_18005 - isocitrate lyase, at 3,827,942 to 3,829,243 _18005 IAI47_18010: IAI47_18010 - malate synthase A, at 3,829,261 to 3,830,859 _18010 IAI47_18015: IAI47_18015 - homoserine O-succinyltransferase, at 3,831,122 to 3,832,051 _18015
Group Condition IAI47_17995 IAI47_18000 IAI47_18005 IAI47_18010 IAI47_18015
carbon source Ying_Others16 rep A; time point 3 -0.1 -0.2 -0.6 -0.6 -4.4
carbon source Ying_Others16 rep B; time point 3 -0.1 -0.2 -0.6 -0.4 -4.5
carbon source Ying_Nucleobase14 rep B; time point 3 -0.2 -0.2 -0.4 -0.4 -4.6
stress Aluminum potassium sulfate dodecahydrate 1 mM, aerobic -0.0 +0.1 -0.0 +0.1 -5.8
carbon source Ying_Others16 rep C; time point 3 +0.0 -0.2 -0.5 -0.5 -4.4
carbon source Ying_Nucleobase14 rep A; time point 3 -0.3 -0.1 -0.4 -0.3 -4.4
carbon source Ying_Others16 rep A; time point 2 -0.2 -0.1 -0.5 -0.2 -4.5
stress Cobalt chloride 10 uM, aerobic -0.1 -0.0 -0.2 +0.0 -5.2
stress dichromate 5 uM, aerobic -0.2 +0.1 -0.0 -0.0 -5.3
stress Aluminum potassium sulfate dodecahydrate 1 mM, aerobic -0.1 +0.0 +0.0 +0.0 -5.3
carbon source Ying_Nucleobase14 rep C; time point 3 -0.1 -0.2 -0.2 -0.4 -4.4
stress Cadmium acetate 8 uM, aerobic -0.0 +0.0 +0.0 +0.1 -5.4
stress Uranyl Acetate Dihydrate 200 uM, aerobic +0.1 -0.0 +0.0 +0.1 -5.4
carbon source Ying_Others16 rep C; time point 2 -0.1 -0.2 -0.3 -0.4 -4.3
stress Cobalt chloride 10 uM, aerobic -0.0 +0.0 +0.1 +0.0 -5.3
carbon source Ying_OrganicAcid7 rep C; time point 2 -0.1 -0.0 -0.3 -0.2 -4.4
carbon source Ying_OrganicAcid7 rep C; time point 3 +0.2 -0.1 -0.3 -0.3 -4.4
carbon source Ying_OrganicAcid7 rep A; time point 2 +0.1 -0.0 -0.2 -0.2 -4.5
no stress control Defined media control, aerobic +0.0 +0.2 -0.1 +0.0 -5.0
no stress control Defined media control, aerobic -0.1 +0.1 +0.1 -0.1 -4.9
carbon source Ying_sugar7 rep B; time point 3 +0.2 -0.1 -0.3 -0.1 -4.5
carbon source Ying_sugar7 rep C; time point 3 +0.2 -0.1 -0.1 -0.3 -4.6
carbon source Ying_sugar7 rep A; time point 3 +0.2 -0.2 -0.1 -0.2 -4.5
carbon source Ying_OrganicAcid7 rep B; time point 3 +0.4 -0.1 -0.3 -0.3 -4.3
stress Uranyl Acetate Dihydrate 200 uM, aerobic +0.1 +0.0 +0.0 +0.1 -4.8
stress copper (II) chloride 5 uM, aerobic -0.0 +0.1 +0.1 +0.1 -4.8
stress copper (II) chloride 5 uM, aerobic +0.2 +0.0 -0.0 +0.1 -4.6
carbon source Ying_OrganicAcid7 rep A; time point 3 +0.5 -0.0 -0.1 -0.2 -4.3
stress Uranyl Acetate Dihydrate 200 uM, aerobic -0.0 +0.1 +0.1 +0.2 -4.3
no stress control Defined media control, aerobic +0.1 +0.2 +0.2 +0.2 -4.3
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