Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_17850 and IAI47_17855 are separated by 96 nucleotidesIAI47_17855 and IAI47_17860 are separated by 211 nucleotidesIAI47_17860 and IAI47_17865 are separated by 180 nucleotidesIAI47_17865 and IAI47_17870 are separated by 105 nucleotides IAI47_17850: IAI47_17850 - replicative DNA helicase, at 3,790,552 to 3,791,958 _17850 IAI47_17855: IAI47_17855 - quinone oxidoreductase, at 3,792,055 to 3,793,038 _17855 IAI47_17860: IAI47_17860 - envelope stress response protein PspG, at 3,793,250 to 3,793,516 _17860 IAI47_17865: IAI47_17865 - tRNA dihydrouridine(20/20a) synthase DusA, at 3,793,697 to 3,794,689 _17865 IAI47_17870: IAI47_17870 - conjugal transfer protein TraF, at 3,794,795 to 3,796,045 _17870
Group Condition IAI47_17850 IAI47_17855 IAI47_17860 IAI47_17865 IAI47_17870
no stress control Defined media control, anaerobic N.D. -0.1 -0.8 -0.1 -0.5
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. +0.0 -0.8 -0.1 -0.3
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. -0.2 -0.6 -0.1 -0.2
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. +0.1 -0.7 -0.1 -0.3
no stress control Defined media control, anaerobic N.D. +0.0 -0.5 -0.0 -0.4
carbon source Ying_sugar7 rep B; time point 3 N.D. -0.0 -0.5 -0.4 +0.1
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. +0.1 -0.7 +0.1 -0.1
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. +0.1 -0.9 +0.1 +0.1
carbon source Ying_Others16 rep A; time point 3 N.D. +0.0 -0.4 -0.5 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. +0.3 -0.8 -0.1 +0.0
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -0.1 +0.4 -0.3 -0.4
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. +0.0 +0.3 -0.2 -0.5
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. +0.2 -0.2 +0.1 -0.4
no stress control Defined media control, aerobic N.D. -0.0 -0.2 +0.4 -0.3
carbon source Ying_all64 rep B; time point 3 N.D. +0.2 -0.3 -0.4 +0.4
stress Manganese (II) chloride tetrahydrate 50 uM, anaerobic N.D. -0.0 +0.5 -0.1 -0.4
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. +0.1 +0.4 +0.1 -0.6
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -0.0 +0.8 +0.0 -0.4
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. +0.1 +0.7 -0.1 -0.2
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. +0.3 +0.3 +0.2 -0.3
stress copper (II) chloride 2 uM, anaerobic N.D. +0.3 -0.3 +0.4 +0.0
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. +0.1 +0.4 +0.3 -0.3
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. +0.3 +0.5 -0.1 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 N.D. +0.0 +0.7 +0.2 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 N.D. +0.1 +0.6 +0.3 -0.1
nitrogen source Ammonium chloride (N) N.D. +0.1 -0.6 -0.3 +1.8
nitrogen source TNT (N) N.D. +0.0 -0.2 -0.3 +1.8
nitrogen source TNT (N) N.D. +0.0 -0.2 -0.3 +2.0
nitrogen source TNT (N) N.D. -0.0 -0.1 -0.1 +1.9
nitrogen source TNT (N) N.D. +0.1 +0.1 -0.2 +1.9
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