Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_17825 and IAI47_17830 overlap by 1 nucleotidesIAI47_17830 and IAI47_17835 are separated by 121 nucleotidesIAI47_17835 and IAI47_17840 are separated by 40 nucleotidesIAI47_17840 and IAI47_17845 are separated by 241 nucleotides IAI47_17825: IAI47_17825 - MmcQ/YjbR family DNA-binding protein, at 3,786,989 to 3,787,312 _17825 IAI47_17830: IAI47_17830 - YjbQ family protein, at 3,787,312 to 3,787,731 _17830 IAI47_17835: IAI47_17835 - aspartate/tyrosine/aromatic aminotransferase, at 3,787,853 to 3,789,046 _17835 IAI47_17840: IAI47_17840 - YitT family protein, at 3,789,087 to 3,789,701 _17840 IAI47_17845: IAI47_17845 - Lrp/AsnC family transcriptional regulator, at 3,789,943 to 3,790,422 _17845
Group Condition IAI47_17825 IAI47_17830 IAI47_17835 IAI47_17840 IAI47_17845
nitrogen source Ammonium chloride (N) -0.4 -0.4 N.D. -0.2 -0.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=1hrs; Outgrowth=LBkan50 -0.6 -0.0 N.D. -0.1 -0.4
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=6hrs; Outgrowth=LBkan50 -0.8 -0.2 N.D. -0.2 +0.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 -0.2 N.D. -0.2 -0.2
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.1 +0.2 N.D. -0.1 -0.1
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -0.4 N.D. -0.2 -0.3
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.8 +0.1 N.D. -0.0 -0.3
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 -0.2 N.D. -0.3 -0.0
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.5 -0.2 N.D. +0.1 -0.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.9 +0.1 N.D. +0.0 +0.1
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.5 +0.0 N.D. +0.2 -0.3
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.5 -0.1 N.D. +0.5 -0.4
stress copper (II) chloride 2 uM, anaerobic -0.3 -0.4 N.D. +0.3 -0.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.3 -0.3 N.D. +0.1 +0.3
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 -0.3 N.D. -0.3 +0.4
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.3 +0.3 N.D. -0.4 +0.3
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 -0.1 N.D. +0.1 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -0.3 N.D. +0.5 -0.0
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=6hrs; Outgrowth=LBkan50 -0.5 +0.5 N.D. -0.1 +0.1
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 +0.2 N.D. -0.2 -0.2
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.5 +0.1 N.D. -0.2 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.8 -0.2 N.D. -0.1 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 +0.5 N.D. +0.4 -0.0
stress copper (II) chloride 2 uM, anaerobic +0.7 +0.5 N.D. -0.1 -0.5
carbon source Ying_OrganicAcid7 rep B; time point 3 -0.1 +0.3 N.D. +0.2 +0.4
stress copper (II) chloride 5 uM, aerobic +0.5 +0.3 N.D. +0.1 -0.0
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +1.0 +0.1 N.D. -0.2 +0.2
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 +0.3 N.D. +0.2 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.6 +0.2 N.D. +0.2 +0.3
stress copper (II) chloride 2 uM, anaerobic +0.2 +0.3 N.D. +0.6 +0.3
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