Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_17680 and IAI47_17685 are separated by 105 nucleotidesIAI47_17685 and IAI47_17690 overlap by 4 nucleotidesIAI47_17690 and IAI47_17695 are separated by 227 nucleotidesIAI47_17695 and IAI47_17700 overlap by 1 nucleotides IAI47_17680: IAI47_17680 - MFS transporter, at 3,752,718 to 3,753,905 _17680 IAI47_17685: IAI47_17685 - AraC family transcriptional regulator, at 3,754,011 to 3,754,976 _17685 IAI47_17690: IAI47_17690 - PAS domain-containing protein, at 3,754,973 to 3,756,517 _17690 IAI47_17695: IAI47_17695 - PTS N-acetylmuramic acid transporter subunit IIBC, at 3,756,745 to 3,758,199 _17695 IAI47_17700: IAI47_17700 - N-acetylmuramic acid 6-phosphate etherase, at 3,758,199 to 3,759,110 _17700
Group Condition IAI47_17680 IAI47_17685 IAI47_17690 IAI47_17695 IAI47_17700
carbon source Ying_Others16 rep C; time point 3 -0.1 -0.2 -0.2 -4.1 -4.2
carbon source Ying_Others16 rep B; time point 3 +0.0 -0.2 -0.1 -4.1 -4.2
carbon source Ying_Others16 rep A; time point 3 -0.0 -0.1 -0.1 -3.9 -4.2
carbon source Ying_Others16 rep A; time point 2 +0.1 -0.4 -0.1 -3.0 -2.9
carbon source Ying_Others16 rep C; time point 2 -0.0 -0.0 -0.1 -3.1 -2.9
carbon source Ying_Others16 rep B; time point 2 +0.1 -0.2 -0.1 -2.9 -3.0
carbon source Ying_Others16 rep A; time point 1 -0.1 -0.2 -0.1 -1.8 -1.8
carbon source Ying_Others16 rep C; time point 1 -0.1 -0.4 +0.0 -1.7 -1.7
carbon source Ying_Others16 rep B; time point 1 +0.0 -0.0 -0.0 -2.0 -1.8
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -0.3 -0.5 +0.1 -0.3
stress copper (II) chloride 2 uM, anaerobic -0.1 -0.7 -0.2 -0.2 +0.3
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 -0.6 -0.0 +0.0 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.5 -0.1 +0.1 -0.6
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 +0.3 +0.1 +0.3 -1.4
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 +0.4 -0.3 -0.1 -0.6
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +0.1 -0.4 -0.0 -0.6
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 +0.1 -0.2 +0.4 -0.8
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.1 +0.1 +0.1 -0.8
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.3 -0.3 +0.3 -0.9
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50 -0.0 +0.4 -0.3 +0.1 -0.8
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 +0.4 -0.3 +0.2 -0.5
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.5 -0.3 +0.2 -0.7
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +0.5 -0.5 +0.2 -0.6
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +0.4 -0.2 +0.2 -0.5
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +0.3 +0.0 +0.1 -0.7
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=12hrs; Outgrowth=LBkan50 +0.2 +0.5 -0.6 -0.0 -0.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.3 -0.6 +0.3 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 +0.5 -0.4 +0.2 -0.3
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 +0.6 -0.6 +0.1 +0.3
survival Survival; Treatment=FW106 (pH3.9); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.3 +0.5 +0.1 -0.3 +0.6
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IAI47_17680
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IAI47_17685
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IAI47_17700
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