Fitness for 5 genes in Pantoea sp. MT58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 309 experiments or choose conditions or try the comparative fitness browser

500 ntIAI47_17530 and IAI47_17535 are separated by 103 nucleotidesIAI47_17535 and IAI47_17540 overlap by 1 nucleotidesIAI47_17540 and IAI47_17545 are separated by 57 nucleotidesIAI47_17545 and IAI47_17550 are separated by 550 nucleotides IAI47_17530: IAI47_17530 - glycoside hydrolase family 28 protein, at 3,716,584 to 3,717,915 _17530 IAI47_17535: IAI47_17535 - carbohydrate ABC transporter permease, at 3,718,019 to 3,718,834 _17535 IAI47_17540: IAI47_17540 - sugar ABC transporter permease, at 3,718,834 to 3,719,706 _17540 IAI47_17545: IAI47_17545 - extracellular solute-binding protein, at 3,719,764 to 3,721,095 _17545 IAI47_17550: IAI47_17550 - GNAT family N-acetyltransferase, at 3,721,646 to 3,722,245 _17550
Group Condition IAI47_17530 IAI47_17535 IAI47_17540 IAI47_17545 IAI47_17550
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -0.2 -0.1 -0.0 -0.7
stress copper (II) chloride 2 uM, anaerobic -0.2 -0.2 -0.0 -0.2 -0.4
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.3 -0.4 +0.0 +0.1 -0.3
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 -0.4 +0.3 +0.1 -0.4
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.3 -0.1 -0.2 -0.6
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.0 -0.4 +0.2 +0.1 -0.4
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.3 +0.3 +0.1 +0.1 -0.6
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.3 -0.1 -0.0 +0.2 -0.5
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.4 -0.1 +0.0 +0.3
stress copper (II) chloride 2 uM, anaerobic -0.2 +0.2 -0.3 -0.1 +0.3
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.4 -0.2 +0.0 +0.1 -0.3
survival Survival; Treatment=FW106 (pH3.9); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 -0.7 -0.0 +0.1 +0.9
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 +0.3 -0.1 -0.1 -0.3
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 +0.0 -0.1 -0.1 +0.7
carbon source Ying_Others16 rep A; time point 3 +0.2 -0.3 -0.0 -0.0 +0.5
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 +0.5 +0.1 +0.3 +0.4
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 +0.0 -0.0 -0.1 +0.4
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=6hrs; Outgrowth=LBkan50 -0.1 -0.1 +0.4 +0.2 +0.4
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 -0.2 +0.1 +0.2 +0.5
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.3 +0.2 +0.1 +0.5
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 +0.4 -0.0 -0.1 +0.2
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +0.2 +0.1 +0.1 +0.5
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.1 +0.3 +0.2 +0.5
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.1 +0.3 +0.0 +0.5
carbon source Ying_sugar7 rep C; time point 2 +0.4 +0.3 -0.2 +0.3 +0.3
stress copper (II) chloride 2 uM, anaerobic +0.2 +0.2 -0.1 +0.1 +0.7
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.1 +0.1 +0.1 +0.6
carbon source Ying_sugar7 rep B; time point 2 +0.2 +0.2 -0.0 +0.1 +0.5
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 +0.3 +0.2 +0.2 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=6hrs; Outgrowth=LBkan50 +0.2 +0.1 +0.3 +0.2 +0.4
remove
IAI47_17530
plot		 remove
IAI47_17535
plot		 remove
IAI47_17540		 remove
IAI47_17545
plot		 remove
IAI47_17550
plot