Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_17430 and IAI47_17435 are separated by 32 nucleotidesIAI47_17435 and IAI47_17440 are separated by 0 nucleotidesIAI47_17440 and IAI47_17445 overlap by 4 nucleotidesIAI47_17445 and IAI47_17450 are separated by 172 nucleotides IAI47_17430: IAI47_17430 - DUF3304 domain-containing protein, at 3,692,296 to 3,692,907 _17430 IAI47_17435: IAI47_17435 - DUF4123 domain-containing protein, at 3,692,940 to 3,693,725 _17435 IAI47_17440: IAI47_17440 - type VI secretion system tip protein VgrG, at 3,693,726 to 3,696,104 _17440 IAI47_17445: IAI47_17445 - type VI secretion system ATPase TssH, at 3,696,101 to 3,698,755 _17445 IAI47_17450: IAI47_17450 - type VI secretion system effector Hcp, at 3,698,928 to 3,699,419 _17450
Group Condition IAI47_17430 IAI47_17435 IAI47_17440 IAI47_17445 IAI47_17450
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.6 -0.8 +0.1 +0.1 -0.6
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.6 +0.2 -0.4 -0.1 -0.8
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 -0.3 -0.2 -0.0 -0.4
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 -0.2 -0.3 +0.1 -0.5
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 +0.0 -0.4 +0.0 -0.6
stress copper (II) chloride 2 uM, anaerobic -0.6 -0.2 -0.0 -0.2 -0.3
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.6 -0.6 -0.0 +0.2 -0.4
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 -0.1 -0.3 +0.1 -0.6
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 -0.0 -0.2 -0.0 -0.4
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -0.3 -0.4 +0.2 -0.5
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.7 -0.3 +0.2 +0.3 -0.6
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.6 +0.1 -0.0 -0.0 -0.4
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -0.2 -0.3 -0.0 -0.3
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 +0.2 -0.2 +0.1 -0.4
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 +0.2 +0.0 -0.1 -0.4
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 +0.4 -0.2 +0.1 -0.6
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 -0.3 +0.1 +0.2 -0.4
nitrogen source nitrogen source nitrate 20mM -0.4 +0.2 +0.0 -0.2 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 +0.1 -0.2 +0.1 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50 -0.2 -0.2 +0.2 +0.3 -0.3
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 +0.3 -0.1 +0.4 -0.0
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 +0.4 +0.1 +0.0 +0.4
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.4 +0.4 +0.1 +0.0 -0.3
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.3 +0.2 -0.2 -0.0 +0.3
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +0.5 +0.2 -0.2 +0.0
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 +0.4 +0.1 +0.2 -0.2
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.5 +0.4 +0.1 -0.2 +0.2
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 +0.3 +0.0 -0.1 +0.5
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 +0.2 -0.0 +0.1 +0.4
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 -0.0 +0.2 +0.3 +0.5
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IAI47_17430
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IAI47_17435
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IAI47_17440		 remove
IAI47_17445
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IAI47_17450
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