Fitness for 5 genes in Pantoea sp. MT58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 309 experiments or choose conditions or try the comparative fitness browser

500 ntIAI47_17290 and IAI47_17295 are separated by 43 nucleotidesIAI47_17295 and IAI47_17300 are separated by 53 nucleotidesIAI47_17300 and IAI47_17305 are separated by 323 nucleotidesIAI47_17305 and IAI47_17310 are separated by 49 nucleotides IAI47_17290: IAI47_17290 - elongation factor P, at 3,663,123 to 3,663,689 _17290 IAI47_17295: IAI47_17295 - EF-P beta-lysylation protein EpmB, at 3,663,733 to 3,664,761 _17295 IAI47_17300: IAI47_17300 - DUF4156 domain-containing protein, at 3,664,815 to 3,665,162 _17300 IAI47_17305: IAI47_17305 - chaperonin GroEL, at 3,665,486 to 3,667,135 _17305 IAI47_17310: IAI47_17310 - co-chaperone GroES, at 3,667,185 to 3,667,478 _17310
Group Condition IAI47_17290 IAI47_17295 IAI47_17300 IAI47_17305 IAI47_17310
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. -0.6 N.D. N.D.
stress copper (II) chloride 2 uM, anaerobic N.D. N.D. -0.5 N.D. N.D.
no stress control Defined media control, aerobic N.D. N.D. -0.5 N.D. N.D.
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. -0.4 N.D. N.D.
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. -0.4 N.D. N.D.
no stress control Defined media control, anaerobic N.D. N.D. -0.4 N.D. N.D.
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. -0.4 N.D. N.D.
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. N.D. -0.4 N.D. N.D.
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50 N.D. N.D. -0.4 N.D. N.D.
stress copper (II) chloride 2 uM, anaerobic N.D. N.D. -0.4 N.D. N.D.
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. -0.4 N.D. N.D.
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. -0.4 N.D. N.D.
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. -0.4 N.D. N.D.
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. -0.4 N.D. N.D.
survival Survival; Treatment=FW106 (pH3.9); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. N.D. -0.3 N.D. N.D.
carbon source Ying_OrganicAcid7 rep C; time point 1 N.D. N.D. -0.3 N.D. N.D.
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. -0.3 N.D. N.D.
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. +0.4 N.D. N.D.
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. N.D. +0.4 N.D. N.D.
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. +0.4 N.D. N.D.
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. +0.4 N.D. N.D.
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. N.D. +0.4 N.D. N.D.
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. +0.5 N.D. N.D.
carbon source Ying_all64 rep B; time point 3 N.D. N.D. +0.5 N.D. N.D.
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. +0.5 N.D. N.D.
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. +0.5 N.D. N.D.
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. +0.5 N.D. N.D.
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. +0.5 N.D. N.D.
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. +0.6 N.D. N.D.
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. +0.7 N.D. N.D.
remove
IAI47_17290
plot		 remove
IAI47_17295
plot		 remove
IAI47_17300		 remove
IAI47_17305
plot		 remove
IAI47_17310
plot