Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_17170 and IAI47_17175 overlap by 26 nucleotidesIAI47_17175 and IAI47_17180 are separated by 5 nucleotidesIAI47_17180 and IAI47_17185 are separated by 48 nucleotidesIAI47_17185 and IAI47_17190 are separated by 21 nucleotides IAI47_17170: IAI47_17170 - LPS export ABC transporter periplasmic protein LptC, at 3,636,146 to 3,636,718 _17170 IAI47_17175: IAI47_17175 - lipopolysaccharide ABC transporter substrate-binding protein LptA, at 3,636,693 to 3,637,244 _17175 IAI47_17180: IAI47_17180 - LPS export ABC transporter ATP-binding protein, at 3,637,250 to 3,637,975 _17180 IAI47_17185: IAI47_17185 - RNA polymerase factor sigma-54, at 3,638,024 to 3,639,457 _17185 IAI47_17190: IAI47_17190 - ribosome hibernation promoting factor, at 3,639,479 to 3,639,766 _17190
Group Condition IAI47_17170 IAI47_17175 IAI47_17180 IAI47_17185 IAI47_17190
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.8 N.D. N.D. -3.9 -0.3
stress copper (II) chloride 5 uM, aerobic -0.5 N.D. N.D. -4.1 +0.0
stress Nickel (II) chloride 40 uM, aerobic -0.5 N.D. N.D. -4.1 -0.0
stress Uranyl Acetate Dihydrate 200 uM, aerobic -0.1 N.D. N.D. -4.2 -0.3
stress Nickel (II) chloride 40 uM, aerobic -0.3 N.D. N.D. -4.3 -0.0
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 N.D. N.D. -3.9 -0.1
stress Aluminum potassium sulfate dodecahydrate 1 mM, aerobic +0.2 N.D. N.D. -4.6 -0.0
stress copper (II) chloride 5 uM, aerobic -0.3 N.D. N.D. -4.1 -0.1
stress Nickel (II) chloride 40 uM, aerobic -0.0 N.D. N.D. -4.2 -0.2
stress Aluminum potassium sulfate dodecahydrate 1 mM, aerobic +0.2 N.D. N.D. -4.4 -0.1
stress copper (II) chloride 5 uM, aerobic -0.3 N.D. N.D. -4.0 -0.1
stress Uranyl Acetate Dihydrate 200 uM, aerobic -0.2 N.D. N.D. -4.0 -0.1
no stress control Defined media control, aerobic +0.3 N.D. N.D. -4.4 -0.1
stress Cobalt chloride 10 uM, anaerobic -0.0 N.D. N.D. -4.0 -0.2
stress Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic -0.2 N.D. N.D. -4.0 +0.0
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 N.D. N.D. -3.7 +0.0
stress Aluminum potassium sulfate dodecahydrate 1 mM, aerobic +0.1 N.D. N.D. -4.2 -0.0
carbon source Ying_sugar7 rep C; time point 3 -0.6 N.D. N.D. -3.5 +0.0
stress Manganese (II) chloride tetrahydrate 50 uM, aerobic +0.3 N.D. N.D. -4.3 +0.0
stress Uranyl Acetate Dihydrate 200 uM, anaerobic +0.2 N.D. N.D. -4.1 -0.1
stress Manganese (II) chloride tetrahydrate 50 uM, aerobic +0.2 N.D. N.D. -3.9 -0.2
nitrogen source nitrogen source Ammonium chloride 20mM +0.5 N.D. N.D. -4.3 -0.0
stress Manganese (II) chloride tetrahydrate 50 uM, aerobic +0.3 N.D. N.D. -4.2 +0.1
no stress control Defined media control, aerobic +0.4 N.D. N.D. -4.0 -0.2
stress Cobalt chloride 10 uM, aerobic +0.3 N.D. N.D. -3.9 +0.0
no stress control Defined media control, anaerobic +0.4 N.D. N.D. -3.9 -0.1
no stress control Defined media control, aerobic +0.4 N.D. N.D. -3.8 -0.0
stress dichromate 5 uM, aerobic +0.6 N.D. N.D. -3.6 -0.2
stress dichromate 5 uM, aerobic +0.7 N.D. N.D. -3.6 -0.0
stress dichromate 5 uM, aerobic +1.0 N.D. N.D. -3.8 -0.1
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