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Protein
Homologs
Fitness for 5 genes in
Pantoea sp. MT58
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500 nt
IAI47_17155 and IAI47_17160 are separated by 16 nucleotides
IAI47_17160 and IAI47_17165 are separated by 13 nucleotides
IAI47_17165 and IAI47_17170 overlap by 4 nucleotides
IAI47_17170 and IAI47_17175 overlap by 26 nucleotides
IAI47_17155: IAI47_17155 - calcium/sodium antiporter, at 3,633,589 to 3,634,569
_17155
IAI47_17160: IAI47_17160 - arabinose-5-phosphate isomerase KdsD, at 3,634,586 to 3,635,569
_17160
IAI47_17165: IAI47_17165 - 3-deoxy-manno-octulosonate-8-phosphatase KdsC, at 3,635,583 to 3,636,149
_17165
IAI47_17170: IAI47_17170 - LPS export ABC transporter periplasmic protein LptC, at 3,636,146 to 3,636,718
_17170
IAI47_17175: IAI47_17175 - lipopolysaccharide ABC transporter substrate-binding protein LptA, at 3,636,693 to 3,637,244
_17175
Group
Condition
IAI47
_17155
IAI47
_17160
IAI47
_17165
IAI47
_17170
IAI47
_17175
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50
-3.6
N.D.
-1.3
+0.2
N.D.
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50
-3.6
N.D.
-1.1
+0.2
N.D.
survival
Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-2.9
N.D.
-1.7
+0.3
N.D.
survival
Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-2.8
N.D.
-1.5
+0.1
N.D.
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50
-3.3
N.D.
-1.3
+0.5
N.D.
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-3.4
N.D.
-0.8
+0.1
N.D.
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-3.2
N.D.
-0.8
+0.0
N.D.
survival
Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-2.8
N.D.
-1.7
+0.7
N.D.
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-3.1
N.D.
-0.8
+0.2
N.D.
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50
-2.7
N.D.
-1.0
-0.0
N.D.
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50
-3.0
N.D.
-0.9
+0.2
N.D.
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50
-3.2
N.D.
-1.1
+0.6
N.D.
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-2.5
N.D.
-1.2
+0.1
N.D.
survival
Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
-2.3
N.D.
-0.7
-0.5
N.D.
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50
-2.9
N.D.
-1.1
+0.5
N.D.
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50
-3.0
N.D.
-1.1
+0.6
N.D.
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50
-3.0
N.D.
-0.9
+0.6
N.D.
survival
Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-2.7
N.D.
-1.4
+0.7
N.D.
survival
Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-2.3
N.D.
-1.1
+0.1
N.D.
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-2.4
N.D.
-1.2
+0.2
N.D.
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-3.0
N.D.
-0.8
+0.5
N.D.
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50
-2.9
N.D.
-0.9
+0.4
N.D.
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-2.6
N.D.
-1.1
+0.5
N.D.
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
-2.4
N.D.
-1.7
+0.9
N.D.
survival
Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-2.5
N.D.
-0.8
+0.3
N.D.
survival
Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-2.1
N.D.
-1.0
+0.5
N.D.
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-1.9
N.D.
-1.3
+0.6
N.D.
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-2.0
N.D.
-1.2
+0.7
N.D.
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
-1.6
N.D.
-1.4
+0.7
N.D.
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
-1.8
N.D.
-1.6
+1.1
N.D.
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