Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_17030 and IAI47_17035 are separated by 24 nucleotidesIAI47_17035 and IAI47_17040 are separated by 211 nucleotidesIAI47_17040 and IAI47_17045 are separated by 59 nucleotidesIAI47_17045 and IAI47_17050 are separated by 37 nucleotides IAI47_17030: IAI47_17030 - transcription termination/antitermination protein NusA, at 3,613,965 to 3,615,452 _17030 IAI47_17035: IAI47_17035 - ribosome maturation factor RimP, at 3,615,477 to 3,615,929 _17035 IAI47_17040: IAI47_17040 - tRNA-Met, at 3,616,141 to 3,616,217 _17040 IAI47_17045: IAI47_17045 - tRNA-Leu, at 3,616,277 to 3,616,363 _17045 IAI47_17050: IAI47_17050 - preprotein translocase subunit SecG, at 3,616,401 to 3,616,739 _17050
Group Condition IAI47_17030 IAI47_17035 IAI47_17040 IAI47_17045 IAI47_17050
stress copper (II) chloride 5 uM, aerobic N.D. -3.4 N.D. N.D. -0.0
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. -1.7 N.D. N.D. -1.5
carbon source Ying_Nucleobase14 rep A; time point 3 N.D. -2.8 N.D. N.D. -0.3
carbon source Ying_sugar7 rep B; time point 3 N.D. -3.1 N.D. N.D. -0.1
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -2.8 N.D. N.D. -0.4
carbon source Ying_sugar7 rep A; time point 2 N.D. -3.6 N.D. N.D. +0.4
carbon source Ying_Nucleobase14 rep C; time point 3 N.D. -2.7 N.D. N.D. -0.4
carbon source Ying_Nucleobase14 rep B; time point 3 N.D. -2.7 N.D. N.D. -0.3
carbon source Ying_Others16 rep C; time point 2 N.D. -3.5 N.D. N.D. +0.5
carbon source Ying_sugar7 rep A; time point 3 N.D. -3.3 N.D. N.D. +0.4
stress copper (II) chloride 5 uM, aerobic N.D. -2.7 N.D. N.D. -0.2
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -2.7 N.D. N.D. -0.2
carbon source Ying_AminoAcid20 rep C; time point 2 N.D. -3.0 N.D. N.D. +0.2
carbon source Ying_Others16 rep B; time point 3 N.D. -3.3 N.D. N.D. +0.5
carbon source Ying_Others16 rep B; time point 2 N.D. -3.2 N.D. N.D. +0.4
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. -2.5 N.D. N.D. -0.2
carbon source Ying_Nucleobase14 rep A; time point 2 N.D. -2.6 N.D. N.D. -0.1
carbon source Ying_Others16 rep A; time point 2 N.D. -3.1 N.D. N.D. +0.4
carbon source Ying_AminoAcid20 rep C; time point 3 N.D. -3.0 N.D. N.D. +0.3
carbon source Ying_sugar7 rep C; time point 3 N.D. -3.2 N.D. N.D. +0.5
carbon source Ying_Others16 rep C; time point 3 N.D. -3.0 N.D. N.D. +0.4
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -2.3 N.D. N.D. -0.3
carbon source Ying_AminoAcid20 rep A; time point 3 N.D. -2.7 N.D. N.D. +0.2
carbon source Ying_AminoAcid20 rep A; time point 2 N.D. -2.7 N.D. N.D. +0.3
nitrogen source nitrogen source nitrate 20mM N.D. -2.7 N.D. N.D. +0.6
carbon source Ying_sugar7 rep B; time point 2 N.D. -2.4 N.D. N.D. +0.4
stress Manganese (II) chloride tetrahydrate 50 uM, aerobic N.D. -2.4 N.D. N.D. +0.5
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. -1.6 N.D. N.D. +1.5
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -1.0 N.D. N.D. +1.7
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -0.9 N.D. N.D. +1.9
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