Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_16745 and IAI47_16750 overlap by 8 nucleotidesIAI47_16750 and IAI47_16755 are separated by 324 nucleotidesIAI47_16755 and IAI47_16760 are separated by 375 nucleotidesIAI47_16760 and IAI47_16765 are separated by 22 nucleotides IAI47_16745: IAI47_16745 - ribokinase, at 3,544,056 to 3,544,937 _16745 IAI47_16750: IAI47_16750 - substrate-binding domain-containing protein, at 3,544,930 to 3,545,880 _16750 IAI47_16755: IAI47_16755 - LacI family DNA-binding transcriptional regulator, at 3,546,205 to 3,547,227 _16755 IAI47_16760: IAI47_16760 - sugar ABC transporter ATP-binding protein, at 3,547,603 to 3,548,349 _16760 IAI47_16765: IAI47_16765 - ABC transporter permease, at 3,548,372 to 3,549,373 _16765
Group Condition IAI47_16745 IAI47_16750 IAI47_16755 IAI47_16760 IAI47_16765
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 -0.0 -0.3 -0.5 -0.4
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 +0.2 -0.3 -0.4 -0.1
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.3 -0.1 -0.3 +0.3 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.0 +0.4 -0.3 -0.5 -0.2
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.6 -0.1 -0.1 +0.2 +0.3
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 +0.3 +0.1 -0.2 -0.0
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.3 -0.2 -0.4 +0.4
nitrogen source nitrogen source nitrate 5mM -0.1 +0.1 -0.3 -0.3 +0.3
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.1 +0.1 -0.4 -0.2
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 +0.5 -0.1 -0.2 -0.1
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 +0.2 -0.1 +0.4 -0.4
stress copper (II) chloride 2 uM, anaerobic -0.3 +0.4 +0.2 -0.2 -0.1
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 +0.2 +0.1 -0.4 +0.4
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.0 +0.1 -0.6 +0.4 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.3 -0.1 -0.5 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 +0.5 -0.2 +0.4 -0.3
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.2 +0.0 +0.4 -0.3
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 +0.3 -0.0 -0.1 -0.3
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 +0.4 -0.1 -0.3 +0.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 +0.1 +0.1 +0.5 -0.2
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.0 +0.4 -0.5 +0.4 +0.2
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 +0.3 +0.1 -0.4 +0.4
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.3 +0.4 -0.2 -0.0
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 +0.1 +0.1 +0.6 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +0.4 -0.3 +0.2 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 +0.3 +0.1 +0.4 -0.2
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 +0.1 +0.2 +0.2 +0.5
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 +0.5 -0.0 +0.1 +0.0
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.3 +0.4 +0.4 +0.3 -0.2
stress copper (II) chloride 2 uM, anaerobic -0.2 +0.8 +0.4 +0.0 +0.5
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IAI47_16750
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