Fitness for 5 genes in Pantoea sp. MT58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 309 experiments or choose conditions or try the comparative fitness browser

500 ntIAI47_16575 and IAI47_16580 are separated by 116 nucleotidesIAI47_16580 and IAI47_16585 overlap by 4 nucleotidesIAI47_16585 and IAI47_16590 are separated by 182 nucleotidesIAI47_16590 and IAI47_16595 overlap by 50 nucleotides IAI47_16575: IAI47_16575 - hypothetical protein, at 3,513,651 to 3,514,658 _16575 IAI47_16580: IAI47_16580 - McrC family protein, at 3,514,775 to 3,516,091 _16580 IAI47_16585: IAI47_16585 - McrB family protein, at 3,516,088 to 3,518,148 _16585 IAI47_16590: IAI47_16590 - DUF4942 domain-containing protein, at 3,518,331 to 3,518,597 _16590 IAI47_16595: IAI47_16595 - DUF4102 domain-containing protein, at 3,518,548 to 3,518,658 _16595
Group Condition IAI47_16575 IAI47_16580 IAI47_16585 IAI47_16590 IAI47_16595
stress copper (II) chloride 2 uM, anaerobic -0.2 +0.0 +0.1 -0.1 -1.9
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -0.4 -0.0 +0.6 -1.9
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.4 -0.4 -0.1 -0.1 -0.8
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.5 -0.3 -0.3 +0.1 -0.8
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 -0.3 -0.2 +0.2 -1.2
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.3 -0.2 +0.1 -0.0 -1.1
survival Survival; Treatment=UGA synthetic gw pH3.9; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 -0.3 +0.1 +0.1 -1.6
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.4 -0.2 -0.2 -0.3 -0.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.4 -0.5 -0.2 -0.0 -0.3
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.5 -0.4 -0.3 +0.0 -0.3
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 -0.2 -0.1 -0.1 -0.6
stress copper (II) chloride 1 uM, anaerobic -0.1 +0.1 +0.1 -0.0 -1.0
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.1 -0.0 -0.4 -0.7
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.6 -0.4 -0.2 +0.1 +0.2
stress Uranyl Acetate Dihydrate 200 uM, aerobic +0.0 +0.1 +0.2 -0.3 -0.9
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.5 -0.4 -0.3 -0.2 +0.5
stress copper (II) chloride 2 uM, anaerobic -0.2 +0.1 +0.3 -0.8 -0.2
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 +0.1 +0.1 +0.1 -0.8
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.1 -0.0 +0.2 -1.0
no stress control Defined media control, aerobic +0.0 +0.1 +0.1 +0.2 -0.9
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.1 +0.2 -0.1 -0.7
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -0.1 -0.0 -0.3 +0.6
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 -0.1 +0.1 +0.7 -0.2
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.1 +0.0 -0.1 +0.9
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 +0.0 -0.1 +0.2 +0.9
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.1 +0.1 -0.1 +0.9
carbon source Ying_sugar7 rep B; time point 2 +0.0 +0.2 -0.1 +0.2 +0.9
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.1 -0.2 +0.4 +0.8
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 +0.0 -0.0 +0.3 +1.2
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.3 +0.2 +0.0 +0.4 +1.0
remove
IAI47_16575
plot		 remove
IAI47_16580
plot		 remove
IAI47_16585		 remove
IAI47_16590
plot		 remove
IAI47_16595
plot