Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_16385 and IAI47_16390 are separated by 28 nucleotidesIAI47_16390 and IAI47_16395 are separated by 146 nucleotidesIAI47_16395 and IAI47_16400 are separated by 231 nucleotidesIAI47_16400 and IAI47_16405 are separated by 194 nucleotides IAI47_16385: IAI47_16385 - tRNA-Leu, at 3,472,337 to 3,472,423 _16385 IAI47_16390: IAI47_16390 - tRNA-Leu, at 3,472,452 to 3,472,538 _16390 IAI47_16395: IAI47_16395 - DUF1435 domain-containing protein, at 3,472,685 to 3,472,969 _16395 IAI47_16400: IAI47_16400 - GGDEF domain-containing protein, at 3,473,201 to 3,474,298 _16400 IAI47_16405: IAI47_16405 - siderophore-iron reductase FhuF, at 3,474,493 to 3,475,287 _16405
Group Condition IAI47_16385 IAI47_16390 IAI47_16395 IAI47_16400 IAI47_16405
nitrogen source nitrogen source nitrite 1mM N.D. -2.0 -0.0 -0.0 -3.2
stress Uranyl Acetate Dihydrate 200 uM, aerobic N.D. -4.0 +0.1 +0.1 -1.1
carbon source Ying_sugar7 rep A; time point 3 N.D. -3.9 +0.0 -1.0 +0.0
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. -4.2 +0.3 -0.1 -0.8
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. -3.2 +0.2 -0.5 -1.2
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -2.9 -0.0 -0.6 -1.2
stress Manganese (II) chloride tetrahydrate 50 uM, anaerobic N.D. -4.1 +0.0 -0.0 -0.6
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. -4.3 +0.1 -0.1 -0.2
nitrogen source nitrogen source nitrate 5mM N.D. -3.7 +0.0 +0.1 -1.0
no stress control Defined media control, anaerobic N.D. -4.1 +0.0 -0.1 -0.2
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. -3.3 +0.2 -0.4 -0.7
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -4.3 -0.1 -0.3 +0.6
no stress control Defined media control, anaerobic N.D. -4.0 -0.4 -0.1 +0.3
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. -3.2 +0.3 -0.3 -0.6
stress Defined media, anaerobic, with FW303 groundwater N.D. -4.4 -0.1 -0.1 +0.9
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -3.4 -0.6 -0.1 +0.3
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -4.3 +0.1 -0.1 +0.6
stress Manganese (II) chloride tetrahydrate 50 uM, anaerobic N.D. -4.1 +0.3 -0.0 +0.1
carbon source Ying_OrganicAcid7 rep A; time point 3 N.D. -3.8 -0.3 -0.2 +0.6
carbon source Ying_sugar7 rep C; time point 1 N.D. -3.6 -0.2 -0.1 +0.4
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -3.4 -0.3 -0.4 +0.8
survival Survival; Treatment=FW106 (pH3.9); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. -4.3 +0.0 +0.3 +0.7
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -3.4 -0.4 -0.2 +1.2
stress copper (II) chloride 2 uM, anaerobic N.D. -3.0 +0.7 -0.8 +0.3
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -4.2 -0.2 +0.1 +1.6
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -3.2 +0.1 -0.2 +0.9
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -4.3 +0.4 -0.0 +1.5
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -3.2 +0.1 +0.1 +1.2
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -3.3 +0.6 -0.1 +1.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. +4.0 -0.4 -0.1 +0.7
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IAI47_16385
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IAI47_16390
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IAI47_16400
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IAI47_16405
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