Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_16370 and IAI47_16375 are separated by 106 nucleotidesIAI47_16375 and IAI47_16380 are separated by 151 nucleotidesIAI47_16380 and IAI47_16385 are separated by 30 nucleotidesIAI47_16385 and IAI47_16390 are separated by 28 nucleotides IAI47_16370: IAI47_16370 - DNA polymerase III subunit psi, at 3,470,520 to 3,470,930 _16370 IAI47_16375: IAI47_16375 - 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC, at 3,471,037 to 3,472,068 _16375 IAI47_16380: IAI47_16380 - tRNA-Leu, at 3,472,220 to 3,472,306 _16380 IAI47_16385: IAI47_16385 - tRNA-Leu, at 3,472,337 to 3,472,423 _16385 IAI47_16390: IAI47_16390 - tRNA-Leu, at 3,472,452 to 3,472,538 _16390
Group Condition IAI47_16370 IAI47_16375 IAI47_16380 IAI47_16385 IAI47_16390
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -0.3 N.D. N.D. -4.3
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -0.3 N.D. N.D. -4.2
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -0.2 N.D. N.D. -4.3
stress Defined media, anaerobic, with FW303 groundwater N.D. -0.1 N.D. N.D. -4.4
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -0.0 N.D. N.D. -4.3
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. +0.0 N.D. N.D. -4.3
stress Uranyl Acetate Dihydrate 200 uM, aerobic N.D. -0.3 N.D. N.D. -4.0
survival Survival; Treatment=FW106 (pH3.9); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. +0.1 N.D. N.D. -4.3
stress Manganese (II) chloride tetrahydrate 50 uM, anaerobic N.D. -0.0 N.D. N.D. -4.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50 N.D. -0.2 N.D. N.D. -3.9
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. +0.2 N.D. N.D. -4.2
stress Manganese (II) chloride tetrahydrate 50 uM, anaerobic N.D. +0.1 N.D. N.D. -4.1
carbon source Ying_sugar7 rep A; time point 3 N.D. -0.1 N.D. N.D. -3.9
no stress control Defined media control, anaerobic N.D. +0.1 N.D. N.D. -4.1
no stress control Defined media control, anaerobic N.D. +0.1 N.D. N.D. -4.0
carbon source Ying_OrganicAcid7 rep A; time point 3 N.D. +0.0 N.D. N.D. -3.8
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -0.5 N.D. N.D. -3.2
nitrogen source nitrogen source nitrate 5mM N.D. -0.0 N.D. N.D. -3.7
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -0.3 N.D. N.D. -3.3
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -0.3 N.D. N.D. -3.2
carbon source Ying_sugar7 rep C; time point 1 N.D. +0.1 N.D. N.D. -3.6
carbon source Ying_Nucleobase14 rep B; time point 1 N.D. +0.1 N.D. N.D. -3.6
no stress control Defined media control, aerobic N.D. +0.0 N.D. N.D. -3.5
no stress control Defined media control, anaerobic N.D. +0.2 N.D. N.D. -3.6
carbon source Ying_Others16 rep B; time point 3 N.D. +0.7 N.D. N.D. -3.9
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. +0.3 N.D. N.D. -3.4
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. +0.4 N.D. N.D. -3.2
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. +0.6 N.D. N.D. -3.4
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. +0.5 N.D. N.D. +3.8
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. +0.4 N.D. N.D. +4.0
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IAI47_16370
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IAI47_16375
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IAI47_16385
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IAI47_16390
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