Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_16355 and IAI47_16360 are separated by 320 nucleotidesIAI47_16360 and IAI47_16365 are separated by 18 nucleotidesIAI47_16365 and IAI47_16370 overlap by 29 nucleotidesIAI47_16370 and IAI47_16375 are separated by 106 nucleotides IAI47_16355: IAI47_16355 - YtjB family periplasmic protein, at 3,468,438 to 3,469,088 _16355 IAI47_16360: IAI47_16360 - pyrimidine 5'-nucleotidase, at 3,469,409 to 3,470,089 _16360 IAI47_16365: IAI47_16365 - ribosomal protein S18-alanine N-acetyltransferase, at 3,470,108 to 3,470,548 _16365 IAI47_16370: IAI47_16370 - DNA polymerase III subunit psi, at 3,470,520 to 3,470,930 _16370 IAI47_16375: IAI47_16375 - 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC, at 3,471,037 to 3,472,068 _16375
Group Condition IAI47_16355 IAI47_16360 IAI47_16365 IAI47_16370 IAI47_16375
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.8 -0.8 N.D. -0.3
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 -0.7 -0.4 N.D. -0.5
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50 -0.6 -0.2 -0.6 N.D. -0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50 -0.7 +0.1 -0.7 N.D. -0.2
survival Survival; Treatment=FW106 (pH3.9); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 -1.0 -0.4 N.D. +0.1
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 -1.2 -0.3 N.D. +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50 -0.6 +0.7 -0.7 N.D. -0.4
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 -0.4 -0.6 N.D. +0.2
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +0.2 -1.2 N.D. -0.2
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 -0.4 -0.5 N.D. -0.5
carbon source Ying_all64 rep C; time point 3 -0.3 +0.1 -1.1 N.D. +0.3
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 -0.2 -1.1 N.D. -0.1
carbon source Ying_all64 rep B; time point 3 -0.3 +0.3 -1.2 N.D. +0.3
carbon source Ying_Others16 rep A; time point 2 -0.2 -0.1 -0.9 N.D. +0.4
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.8 +0.2 -0.3 N.D. +0.4
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.1 -0.0 -0.1 N.D. +0.8
carbon source Ying_Others16 rep C; time point 1 -0.0 +0.3 -0.9 N.D. +0.4
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.4 +0.5 -0.2 N.D. +0.8
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.7 +0.6 -0.4 N.D. +0.3
carbon source Ying_Others16 rep B; time point 3 -0.1 -0.2 -0.6 N.D. +0.7
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.2 +0.6 +0.0 N.D. +0.6
carbon source Ying_Others16 rep C; time point 3 -0.1 +0.0 -0.7 N.D. +0.8
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.6 +0.6 -0.4 N.D. +0.4
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 +0.4 -0.4 N.D. +0.6
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.5 +0.7 -0.5 N.D. +0.4
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.7 +0.6 +0.5 N.D. -0.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.9 +1.0 -0.0 N.D. +0.8
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 +0.3 -0.5 N.D. +1.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.5 +0.5 -0.4 N.D. +0.8
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 +0.5 -0.1 N.D. +1.0
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IAI47_16360
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IAI47_16375
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