Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_16335 and IAI47_16340 are separated by 45 nucleotidesIAI47_16340 and IAI47_16345 are separated by 75 nucleotidesIAI47_16345 and IAI47_16350 are separated by 13 nucleotidesIAI47_16350 and IAI47_16355 are separated by 107 nucleotides IAI47_16335: IAI47_16335 - zinc-binding alcohol dehydrogenase family protein, at 3,463,593 to 3,464,594 _16335 IAI47_16340: IAI47_16340 - multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR, at 3,464,640 to 3,465,881 _16340 IAI47_16345: IAI47_16345 - DNA repair protein RadA, at 3,465,957 to 3,467,339 _16345 IAI47_16350: IAI47_16350 - phosphoserine phosphatase, at 3,467,353 to 3,468,330 _16350 IAI47_16355: IAI47_16355 - YtjB family periplasmic protein, at 3,468,438 to 3,469,088 _16355
Group Condition IAI47_16335 IAI47_16340 IAI47_16345 IAI47_16350 IAI47_16355
stress Nickel (II) chloride 40 uM, aerobic +0.1 -0.1 -0.0 -6.0 +0.2
stress Aluminum potassium sulfate dodecahydrate 1 mM, aerobic +0.1 +0.0 -0.0 -5.7 +0.1
stress Nickel (II) chloride 40 uM, aerobic +0.0 -0.2 -0.0 -5.2 +0.1
stress Cobalt chloride 10 uM, anaerobic +0.0 +0.0 -0.1 -5.1 -0.1
stress copper (II) chloride 5 uM, aerobic +0.1 +0.2 +0.0 -5.6 +0.2
stress Nickel (II) chloride 40 uM, aerobic -0.0 -0.1 +0.0 -5.0 +0.0
stress copper (II) chloride 5 uM, aerobic -0.0 +0.1 +0.1 -5.3 +0.1
stress dichromate 2 uM, anaerobic +0.0 +0.1 -0.0 -5.1 -0.0
nitrogen source nitrogen source nitrate 5mM +0.0 +0.3 -0.2 -4.8 -0.2
stress dichromate 2 uM, anaerobic +0.1 -0.0 +0.2 -5.1 +0.0
stress Aluminum potassium sulfate dodecahydrate 1 mM, aerobic +0.1 -0.0 +0.0 -5.0 +0.2
stress Cobalt chloride 10 uM, aerobic +0.2 +0.2 -0.0 -4.9 -0.2
stress copper (II) chloride 5 uM, aerobic +0.0 +0.2 -0.0 -5.0 +0.1
carbon source Ying_sugar7 rep A; time point 2 -0.2 +0.4 -0.1 -4.7 -0.0
carbon source Ying_sugar7 rep B; time point 2 -0.1 +0.4 -0.0 -4.7 -0.2
no stress control Defined media control, aerobic +0.1 +0.1 +0.0 -4.9 +0.1
stress dichromate 5 uM, aerobic +0.1 +0.1 +0.1 -4.9 +0.1
stress Cobalt chloride 10 uM, aerobic +0.2 +0.2 +0.1 -5.0 -0.0
nitrogen source nitrogen source Ammonium chloride 20mM -0.1 +0.4 -0.0 -4.3 -0.4
stress Cadmium acetate 8 uM, aerobic +0.1 +0.2 +0.1 -4.9 +0.1
carbon source Ying_Nucleobase14 rep A; time point 2 -0.0 +0.3 +0.1 -4.7 -0.0
carbon source Ying_Others16 rep A; time point 3 -0.1 +0.4 -0.2 -4.3 -0.1
carbon source Ying_sugar7 rep B; time point 3 -0.1 +0.4 +0.0 -4.4 -0.3
stress Cobalt chloride 10 uM, aerobic +0.2 +0.1 +0.1 -4.9 +0.2
stress Uranyl Acetate Dihydrate 200 uM, aerobic +0.0 +0.2 +0.2 -4.7 +0.1
carbon source Ying_sugar7 rep C; time point 3 -0.1 +0.4 +0.3 -4.5 -0.2
carbon source Ying_Others16 rep B; time point 3 -0.1 +0.4 +0.2 -4.4 -0.1
carbon source Ying_Nucleobase14 rep B; time point 3 -0.2 +0.5 +0.2 -4.5 -0.0
carbon source Ying_Nucleobase14 rep A; time point 3 -0.1 +0.6 +0.1 -4.3 -0.2
carbon source Ying_Nucleobase14 rep C; time point 3 -0.1 +0.4 +0.1 -4.4 +0.1
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