Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_16320 and IAI47_16325 are separated by 179 nucleotidesIAI47_16325 and IAI47_16330 are separated by 45 nucleotidesIAI47_16330 and IAI47_16335 are separated by 186 nucleotidesIAI47_16335 and IAI47_16340 are separated by 45 nucleotides IAI47_16320: IAI47_16320 - DNA-binding transcriptional repressor DeoR, at 3,459,853 to 3,460,617 _16320 IAI47_16325: IAI47_16325 - energy-dependent translational throttle protein EttA, at 3,460,797 to 3,462,464 _16325 IAI47_16330: IAI47_16330 - LysR family transcriptional regulator, at 3,462,510 to 3,463,406 _16330 IAI47_16335: IAI47_16335 - zinc-binding alcohol dehydrogenase family protein, at 3,463,593 to 3,464,594 _16335 IAI47_16340: IAI47_16340 - multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR, at 3,464,640 to 3,465,881 _16340
Group Condition IAI47_16320 IAI47_16325 IAI47_16330 IAI47_16335 IAI47_16340
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.2 -0.3 +0.1 -0.4 -0.0
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 -0.3 -0.3 -0.3 -0.4
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.9 -0.5 +0.0 +0.2 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 -0.4 -0.2 -0.3 -0.4
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.6 -0.2 -0.4 -0.3 -0.5
stress copper (II) chloride 2 uM, anaerobic +0.1 -0.6 -0.2 -0.4 +0.3
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.5 -0.2 +0.3 -0.5 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.6 -0.5 -0.3 -0.2 -0.4
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.5 +0.1 -0.5 -0.1 -0.5
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.6 -0.3 -0.3 -0.2 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.9 -0.3 -0.3 -0.3 -0.3
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.7 -0.1 -0.3 -0.3 -0.1
carbon source Ying_all64 rep C; time point 1 +0.9 -0.3 -0.3 -0.1 +0.1
carbon source Ying_sugar7 rep A; time point 2 +0.7 -0.3 -0.1 -0.2 +0.4
carbon source Ying_all64 rep A; time point 3 +0.9 -0.2 -0.2 -0.2 +0.2
carbon source Ying_sugar7 rep B; time point 2 +0.8 -0.3 -0.2 -0.1 +0.4
carbon source Ying_all64 rep B; time point 3 +1.0 -0.5 -0.2 +0.1 +0.2
carbon source Ying_all64 rep A; time point 1 +1.0 -0.2 -0.2 +0.0 +0.2
carbon source Ying_Others16 rep C; time point 1 +0.9 +0.1 -0.3 +0.1 +0.2
carbon source Ying_all64 rep A; time point 2 +0.9 -0.1 -0.2 -0.1 +0.4
carbon source Ying_Nucleobase14 rep C; time point 1 +1.3 -0.2 -0.1 -0.2 +0.2
carbon source Ying_Nucleobase14 rep A; time point 1 +1.3 -0.1 -0.4 -0.0 +0.3
carbon source Ying_Nucleobase14 rep B; time point 1 +1.3 -0.1 -0.0 -0.1 +0.2
carbon source Ying_Nucleobase14 rep A; time point 2 +1.3 -0.0 -0.3 -0.0 +0.3
carbon source Ying_Nucleobase14 rep B; time point 2 +1.2 +0.1 -0.1 -0.2 +0.3
carbon source Ying_sugar7 rep C; time point 2 +1.2 +0.0 -0.1 +0.1 +0.3
carbon source Ying_Nucleobase14 rep B; time point 3 +1.5 -0.2 -0.2 -0.2 +0.5
carbon source Ying_Nucleobase14 rep C; time point 3 +1.2 -0.0 +0.0 -0.1 +0.4
carbon source Ying_Nucleobase14 rep C; time point 2 +1.3 +0.0 -0.1 -0.1 +0.3
carbon source Ying_Nucleobase14 rep A; time point 3 +1.5 -0.1 -0.1 -0.1 +0.6
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IAI47_16320
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IAI47_16325
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IAI47_16335
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IAI47_16340
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