Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_15860 and IAI47_15865 are separated by 24 nucleotidesIAI47_15865 and IAI47_15870 are separated by 233 nucleotidesIAI47_15870 and IAI47_15875 are separated by 4 nucleotidesIAI47_15875 and IAI47_15880 are separated by 8 nucleotides IAI47_15860: IAI47_15860 - protein transport protein HofC, at 3,347,772 to 3,348,971 _15860 IAI47_15865: IAI47_15865 - GMP reductase, at 3,348,996 to 3,350,036 _15865 IAI47_15870: IAI47_15870 - dephospho-CoA kinase, at 3,350,270 to 3,350,878 _15870 IAI47_15875: IAI47_15875 - cell division protein ZapD, at 3,350,883 to 3,351,626 _15875 IAI47_15880: IAI47_15880 - DNA gyrase inhibitor YacG, at 3,351,635 to 3,351,832 _15880
Group Condition IAI47_15860 IAI47_15865 IAI47_15870 IAI47_15875 IAI47_15880
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.0 +0.1 N.D. -0.5 -1.9
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.2 N.D. -0.1 -1.9
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.0 -0.2 N.D. -0.2 -1.4
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 +0.1 N.D. +0.1 -1.8
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 +0.3 N.D. -0.8 -0.8
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.0 N.D. -0.6 -0.7
carbon source Ying_Others16 rep B; time point 3 +0.0 -0.2 N.D. -0.4 -0.8
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 +0.0 N.D. -0.1 -1.1
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.2 N.D. +0.0 -1.5
stress copper (II) chloride 2 uM, anaerobic +0.2 -0.1 N.D. +0.0 -1.0
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 +0.4 N.D. -0.4 -1.1
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.3 +0.3 N.D. -0.2 -1.1
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.4 -0.1 N.D. -0.1 -0.9
nitrogen source Ammonium chloride (N) -0.4 +0.0 N.D. +0.5 -0.7
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 -0.4 N.D. -0.6 +0.7
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 +0.3 N.D. -0.4 -0.4
carbon source Ying_sugar7 rep C; time point 2 +0.4 +0.2 N.D. +0.2 -1.0
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 +0.5 N.D. +0.2 -0.6
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 -0.2 N.D. -0.4 +0.6
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 +0.1 N.D. -0.4 +0.7
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 +0.1 N.D. -0.4 +1.0
carbon source Ying_Others16 rep C; time point 1 +0.1 -0.2 N.D. +0.1 +1.0
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 +0.4 N.D. -0.2 +1.0
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 -0.0 N.D. -0.1 +1.4
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 +0.5 N.D. -0.1 +0.5
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.0 N.D. -0.3 +1.5
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 -0.1 N.D. +0.3 +0.8
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 +0.2 N.D. -0.1 +0.9
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +0.0 N.D. +0.3 +0.9
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 +0.3 N.D. -0.3 +1.1
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IAI47_15865
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