Fitness for 5 genes in Pantoea sp. MT58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 309 experiments or choose conditions or try the comparative fitness browser

500 ntIAI47_15810 and IAI47_15815 are separated by 101 nucleotidesIAI47_15815 and IAI47_15820 are separated by 514 nucleotidesIAI47_15820 and IAI47_15825 are separated by 179 nucleotidesIAI47_15825 and IAI47_15830 overlap by 4 nucleotides IAI47_15810: IAI47_15810 - pyruvate dehydrogenase (acetyl-transferring), homodimeric type, at 3,335,329 to 3,337,995 _15810 IAI47_15815: IAI47_15815 - pyruvate dehydrogenase complex transcriptional repressor PdhR, at 3,338,097 to 3,338,861 _15815 IAI47_15820: IAI47_15820 - aromatic amino acid transporter AroP, at 3,339,376 to 3,340,731 _15820 IAI47_15825: IAI47_15825 - MFS transporter, at 3,340,911 to 3,342,323 _15825 IAI47_15830: IAI47_15830 - family 43 glycosylhydrolase, at 3,342,320 to 3,343,279 _15830
Group Condition IAI47_15810 IAI47_15815 IAI47_15820 IAI47_15825 IAI47_15830
stress copper (II) chloride 5 uM, aerobic -4.2 -0.3 +0.1 +0.0 +0.0
stress Nickel (II) chloride 40 uM, aerobic -4.3 +0.0 -0.0 -0.1 +0.1
stress Cobalt chloride 10 uM, aerobic -4.0 -0.1 -0.1 -0.1 +0.0
stress Nickel (II) chloride 40 uM, aerobic -4.0 -0.3 +0.1 +0.0 -0.1
no stress control Defined media control, aerobic -3.9 +0.0 -0.1 -0.0 -0.1
stress Cobalt chloride 10 uM, aerobic -4.0 +0.1 +0.0 +0.1 -0.1
no stress control Defined media control, aerobic -3.6 -0.1 -0.2 -0.0 +0.0
stress Cadmium acetate 8 uM, aerobic -4.0 +0.2 +0.1 +0.1 -0.0
nitrogen source nitrogen source Ammonium chloride 20mM -2.7 -0.9 -0.1 +0.0 -0.1
stress copper (II) chloride 5 uM, aerobic -3.8 +0.2 -0.1 +0.1 -0.0
stress Cadmium acetate 8 uM, aerobic -3.6 +0.1 -0.1 +0.0 -0.0
no stress control Defined media control, aerobic -3.7 +0.1 -0.1 +0.1 +0.2
stress Aluminum potassium sulfate dodecahydrate 1 mM, aerobic -3.3 -0.1 +0.0 -0.1 +0.2
nitrogen source nitrogen source Ammonium chloride 20mM -2.8 -0.7 +0.2 +0.0 +0.1
nitrogen source nitrogen source nitrite 1mM -2.7 -0.7 +0.1 +0.1 +0.1
stress Cobalt chloride 10 uM, aerobic -3.1 +0.4 -0.1 +0.1 -0.1
stress dichromate 5 uM, aerobic -3.9 +1.2 +0.0 -0.1 -0.1
stress dichromate 5 uM, aerobic -3.7 +0.9 +0.0 +0.1 +0.1
stress dichromate 5 uM, aerobic -3.1 +1.1 -0.0 +0.0 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +2.3 +1.0 -0.3 -0.3 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50 +2.8 +0.4 -0.2 +0.0 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +1.9 +1.6 -0.2 +0.0 -0.0
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50 +2.8 +0.6 -0.3 -0.0 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50 +2.4 +0.6 -0.1 -0.1 +0.4
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +2.3 +1.1 -0.3 -0.1 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50 +2.8 +0.8 -0.2 -0.1 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50 +3.0 +0.5 -0.1 -0.1 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50 +2.9 +0.7 -0.3 +0.1 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +2.2 +1.3 -0.1 -0.0 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50 +3.1 +0.8 -0.2 -0.0 -0.0
remove
IAI47_15810
plot
remove
IAI47_15815
plot
remove
IAI47_15820
remove
IAI47_15825
plot
remove
IAI47_15830
plot