Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_15720 and IAI47_15725 are separated by 80 nucleotidesIAI47_15725 and IAI47_15730 are separated by 6 nucleotidesIAI47_15730 and IAI47_15735 overlap by 8 nucleotidesIAI47_15735 and IAI47_15740 are separated by 187 nucleotides IAI47_15720: IAI47_15720 - glycoside hydrolase, at 3,314,132 to 3,315,424 _15720 IAI47_15725: IAI47_15725 - DeoR/GlpR transcriptional regulator, at 3,315,505 to 3,316,269 _15725 IAI47_15730: IAI47_15730 - D-threonate 4-phosphate dehydrogenase, at 3,316,276 to 3,317,256 _15730 IAI47_15735: IAI47_15735 - four-carbon acid sugar kinase family protein, at 3,317,249 to 3,318,517 _15735 IAI47_15740: IAI47_15740 - iron-containing alcohol dehydrogenase, at 3,318,705 to 3,319,853 _15740
Group Condition IAI47_15720 IAI47_15725 IAI47_15730 IAI47_15735 IAI47_15740
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 -2.4 -0.8 -0.2 -0.0
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -1.5 -1.0 +0.1 -0.2
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 -1.5 -1.0 -0.2 -0.1
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 -1.5 -0.8 +0.1 -0.2
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -1.9 -0.1 +0.1 -0.4
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -0.4 -1.6 +0.0 -0.1
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -0.4 -0.3 -0.4 -0.7
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.0 -0.8 -0.8 -0.1 -0.1
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 -1.3 -0.0 -0.2 -0.2
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 -1.3 -0.4 +0.0 -0.1
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -1.3 -0.4 -0.0 -0.0
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -1.7 -0.6 +0.4 +0.1
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.0 -1.1 -0.5 +0.1 -0.0
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -1.2 -0.3 -0.1 -0.0
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -0.1 -1.0 +0.2 -0.4
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -1.0 -0.3 +0.4 -0.2
carbon source Ying_AminoAcid20 rep C; time point 3 +0.0 -1.3 +0.2 +0.1 -0.1
carbon source Ying_AminoAcid20 rep B; time point 3 -0.0 -1.4 +0.3 -0.0 +0.1
carbon source Ying_AminoAcid20 rep A; time point 2 +0.1 -1.1 +0.5 -0.2 +0.0
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -1.0 -0.1 +0.5 +0.0
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 +0.7 -0.9 +0.1 -0.2
carbon source Ying_AminoAcid20 rep B; time point 2 +0.1 -1.1 +0.4 -0.1 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -0.4 -0.6 +0.7 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 +0.5 -0.5 +0.3 -0.4
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 +0.3 -0.5 +0.8 -0.4
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.0 +0.9 -0.7 +0.1 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 +0.9 -0.2 +0.2 -0.4
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 +0.2 +0.7 -0.6 +0.1 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 +1.2 -0.2 +0.4 -0.0
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 +1.6 -0.1 +0.1 -0.1
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IAI47_15720
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IAI47_15725
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IAI47_15735
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IAI47_15740
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