Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_15700 and IAI47_15705 are separated by 181 nucleotidesIAI47_15705 and IAI47_15710 are separated by 102 nucleotidesIAI47_15710 and IAI47_15715 are separated by 27 nucleotidesIAI47_15715 and IAI47_15720 are separated by 174 nucleotides IAI47_15700: IAI47_15700 - multicopper oxidase CueO, at 3,310,012 to 3,311,625 _15700 IAI47_15705: IAI47_15705 - YacC family pilotin-like protein, at 3,311,807 to 3,312,154 _15705 IAI47_15710: IAI47_15710 - polyamine aminopropyltransferase, at 3,312,257 to 3,313,120 _15710 IAI47_15715: IAI47_15715 - adenosylmethionine decarboxylase, at 3,313,148 to 3,313,957 _15715 IAI47_15720: IAI47_15720 - glycoside hydrolase, at 3,314,132 to 3,315,424 _15720
Group Condition IAI47_15700 IAI47_15705 IAI47_15710 IAI47_15715 IAI47_15720
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -4.8 -0.4 +0.2 +0.3 -0.1
stress Nickel (II) chloride 40 uM, aerobic -1.9 +0.2 -0.0 -0.1 -0.0
stress Nickel (II) chloride 40 uM, aerobic -2.2 +0.3 -0.0 -0.1 +0.1
stress Nickel (II) chloride 40 uM, aerobic -2.2 +0.4 +0.0 -0.0 +0.1
stress copper (II) chloride 5 uM, aerobic -1.8 +0.1 -0.0 -0.1 +0.0
stress copper (II) chloride 5 uM, aerobic -1.6 +0.5 -0.1 -0.2 +0.0
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.6 -0.5 -0.2 +0.1 -0.2
stress copper (II) chloride 5 uM, aerobic -1.5 +0.5 -0.0 -0.3 +0.1
stress copper (II) chloride 2 uM, anaerobic -1.7 +0.4 +0.4 -0.2 +0.0
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.3 -0.3 -0.5 +0.0 +0.0
stress copper (II) chloride 2 uM, anaerobic -0.8 +0.4 -0.2 -0.1 -0.1
survival Survival; Treatment=FW106 (pH3.9); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.4 +0.6 -0.4 -0.4 -0.0
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.4 -0.3 +0.1 -0.2
stress Uranyl Acetate Dihydrate 200 uM, aerobic +0.1 +0.2 -0.3 -0.3 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.3 +0.2 +0.1 +0.4 +0.1
stress copper (II) chloride 2 uM, anaerobic -0.7 +0.3 -0.2 +0.1 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 +0.1 +0.4 +0.1 -0.2
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.4 +0.4 -0.2 +0.1 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50 +0.2 -0.5 +0.2 +0.1 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.3 +0.3 +0.2 -0.4 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 +0.5 +0.5 -0.1 -0.2 -0.1
carbon source Ying_Others16 rep B; time point 3 -0.0 -0.2 +0.3 +0.5 -0.0
carbon source Ying_all64 rep C; time point 2 -0.2 -0.1 +0.4 +0.4 +0.1
carbon source Ying_Others16 rep C; time point 2 -0.2 -0.1 +0.5 +0.5 +0.0
carbon source Ying_all64 rep A; time point 2 -0.0 -0.2 +0.5 +0.5 +0.0
carbon source Ying_Others16 rep A; time point 2 -0.0 +0.1 +0.5 +0.4 -0.0
carbon source Ying_AminoAcid20 rep A; time point 2 +0.0 -0.1 +0.6 +0.3 +0.1
carbon source Ying_all64 rep B; time point 2 -0.1 +0.1 +0.5 +0.4 +0.1
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 +0.5 +0.2 +0.3 -0.0
carbon source Ying_all64 rep B; time point 3 +0.1 +0.2 +0.5 +0.4 +0.0
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