Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_15660 and IAI47_15665 are separated by 47 nucleotidesIAI47_15665 and IAI47_15670 are separated by 66 nucleotidesIAI47_15670 and IAI47_15675 are separated by 423 nucleotidesIAI47_15675 and IAI47_15680 overlap by 4 nucleotides IAI47_15660: IAI47_15660 - pantoate--beta-alanine ligase, at 3,302,628 to 3,303,482 _15660 IAI47_15665: IAI47_15665 - aspartate 1-decarboxylase, at 3,303,530 to 3,303,910 _15665 IAI47_15670: IAI47_15670 - acyltransferase family protein, at 3,303,977 to 3,304,990 _15670 IAI47_15675: IAI47_15675 - ABC transporter permease, at 3,305,414 to 3,306,184 _15675 IAI47_15680: IAI47_15680 - ABC transporter ATP-binding protein, at 3,306,181 to 3,307,110 _15680
Group Condition IAI47_15660 IAI47_15665 IAI47_15670 IAI47_15675 IAI47_15680
nitrogen source Ammonium chloride (N) -2.8 -0.2 +0.0 +0.4 +0.0
no stress control Defined media control, aerobic -1.4 -1.2 +0.1 +0.1 +0.1
stress copper (II) chloride 5 uM, aerobic -1.1 -0.8 -0.1 -0.1 -0.1
stress Cadmium acetate 8 uM, aerobic -1.2 -0.8 +0.0 -0.0 +0.0
stress copper (II) chloride 5 uM, aerobic -1.4 -0.8 +0.2 +0.0 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.0 -0.2 -0.9 -0.5 +0.1
stress Nickel (II) chloride 40 uM, aerobic -1.3 -0.3 +0.2 +0.0 -0.1
no stress control Defined media control, aerobic -0.9 -0.6 +0.1 -0.1 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.0 -0.2 -1.0 -0.3 +0.0
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -0.0 -0.7 -0.3 -0.2
stress Nickel (II) chloride 40 uM, aerobic -0.8 -0.5 +0.1 -0.0 -0.1
stress copper (II) chloride 5 uM, aerobic -0.5 -0.7 +0.0 +0.0 -0.2
no stress control Defined media control, aerobic -0.9 -0.6 +0.1 -0.1 +0.2
stress Uranyl Acetate Dihydrate 200 uM, aerobic -1.4 -0.5 +0.1 +0.1 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.0 +0.1 -1.0 -0.1 -0.3
no stress control Defined media control, aerobic -0.9 -0.5 +0.0 -0.0 +0.1
no stress control Defined media control, aerobic -0.2 -1.2 -0.0 -0.0 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 -0.1 -0.7 -0.3 -0.4
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 +0.2 -0.4 -0.3 -0.4
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 -0.7 +0.4 -0.4 -0.2 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 -0.3 +0.2 -0.7 -0.2 -0.2
stress Uranyl Acetate Dihydrate 200 uM, aerobic -0.7 -0.5 +0.1 +0.1 +0.0
stress dichromate 5 uM, aerobic -0.7 -0.2 +0.1 -0.2 +0.3
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.3 +0.1 -0.8 -0.1 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=1hrs; Outgrowth=LBkan50 +0.3 +0.1 -0.6 -0.0 -0.4
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.5 +0.1 -0.3 -0.3 -0.4
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.5 -0.1 -0.5 -0.3 +0.2
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.7 +0.2 +0.1 -0.4 -0.3
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.6 -0.1 -0.4 -0.1 +0.3
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +1.0 -0.0 -0.0 -0.2 +0.2
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