Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_15645 and IAI47_15650 overlap by 4 nucleotidesIAI47_15650 and IAI47_15655 are separated by 83 nucleotidesIAI47_15655 and IAI47_15660 are separated by 15 nucleotidesIAI47_15660 and IAI47_15665 are separated by 47 nucleotides IAI47_15645: IAI47_15645 - polynucleotide adenylyltransferase PcnB, at 3,299,813 to 3,301,252 _15645 IAI47_15650: IAI47_15650 - 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase, at 3,301,249 to 3,301,734 _15650 IAI47_15655: IAI47_15655 - 3-methyl-2-oxobutanoate hydroxymethyltransferase, at 3,301,818 to 3,302,612 _15655 IAI47_15660: IAI47_15660 - pantoate--beta-alanine ligase, at 3,302,628 to 3,303,482 _15660 IAI47_15665: IAI47_15665 - aspartate 1-decarboxylase, at 3,303,530 to 3,303,910 _15665
Group Condition IAI47_15645 IAI47_15650 IAI47_15655 IAI47_15660 IAI47_15665
nitrogen source Ammonium chloride (N) -0.5 N.D. -1.8 -2.8 -0.2
stress copper (II) chloride 5 uM, aerobic +0.0 N.D. -1.5 -1.4 -0.8
no stress control Defined media control, aerobic +0.0 N.D. -1.0 -1.4 -1.2
stress Cadmium acetate 8 uM, aerobic -0.5 N.D. -1.1 -1.2 -0.8
carbon source Ying_Nucleobase14 rep B; time point 3 -3.0 N.D. -0.1 +0.1 +0.1
carbon source Ying_Nucleobase14 rep A; time point 3 -2.8 N.D. -0.3 +0.0 +0.0
stress copper (II) chloride 5 uM, aerobic +0.1 N.D. -1.0 -1.1 -0.8
carbon source Ying_Nucleobase14 rep C; time point 3 -2.6 N.D. -0.2 +0.0 +0.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.0 N.D. -1.2 -0.4 -0.1
carbon source Ying_Nucleobase14 rep B; time point 2 -2.7 N.D. -0.1 +0.2 +0.0
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.6 N.D. -0.9 -0.0 -0.1
carbon source Ying_Nucleobase14 rep A; time point 2 -2.7 N.D. -0.1 +0.2 +0.2
stress Manganese (II) chloride tetrahydrate 50 uM, aerobic -0.4 N.D. -1.1 +0.0 -0.8
stress Uranyl Acetate Dihydrate 200 uM, aerobic -0.3 N.D. -0.9 -0.7 -0.5
no stress control Defined media control, aerobic +0.0 N.D. -0.7 -0.9 -0.6
carbon source Ying_Nucleobase14 rep A; time point 1 -2.0 N.D. -0.2 -0.1 +0.1
no stress control Defined media control, aerobic +0.1 N.D. -0.7 -0.9 -0.6
stress Uranyl Acetate Dihydrate 200 uM, aerobic +0.1 N.D. -0.5 -1.4 -0.5
stress Nickel (II) chloride 40 uM, aerobic -0.1 N.D. -0.5 -1.3 -0.3
stress Nickel (II) chloride 40 uM, aerobic -0.4 N.D. -0.4 -0.8 -0.5
no stress control Defined media control, aerobic -0.1 N.D. -0.5 -0.9 -0.5
carbon source Ying_Nucleobase14 rep C; time point 2 -2.1 N.D. -0.1 +0.1 +0.1
no stress control Defined media control, aerobic -0.1 N.D. -0.4 -0.2 -1.2
carbon source Ying_Nucleobase14 rep C; time point 1 -2.0 N.D. -0.1 +0.1 +0.1
stress copper (II) chloride 5 uM, aerobic +0.4 N.D. -1.0 -0.5 -0.7
stress Uranyl Acetate Dihydrate 200 uM, aerobic +0.1 N.D. -0.8 -0.6 -0.5
carbon source Ying_Nucleobase14 rep B; time point 1 -1.9 N.D. -0.1 +0.3 +0.2
stress copper (II) chloride 2 uM, anaerobic +0.9 N.D. -0.5 -0.8 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +1.4 N.D. +0.5 -0.0 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +1.8 N.D. +0.2 +0.2 -0.1
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