Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_15620 and IAI47_15625 are separated by 30 nucleotidesIAI47_15625 and IAI47_15630 overlap by 23 nucleotidesIAI47_15630 and IAI47_15635 are separated by 247 nucleotidesIAI47_15635 and IAI47_15640 are separated by 73 nucleotides IAI47_15620: IAI47_15620 - ATP-dependent helicase HrpB, at 3,294,339 to 3,296,822 _15620 IAI47_15625: IAI47_15625 - RNA 2',3'-cyclic phosphodiesterase, at 3,296,853 to 3,297,410 _15625 IAI47_15630: IAI47_15630 - DNA/RNA nuclease SfsA, at 3,297,388 to 3,298,092 _15630 IAI47_15635: IAI47_15635 - RNA polymerase-binding protein DksA, at 3,298,340 to 3,298,795 _15635 IAI47_15640: IAI47_15640 - tRNA glutamyl-Q(34) synthetase GluQRS, at 3,298,869 to 3,299,747 _15640
Group Condition IAI47_15620 IAI47_15625 IAI47_15630 IAI47_15635 IAI47_15640
stress Cobalt chloride 10 uM, anaerobic +0.1 -0.2 -0.2 -7.2 -0.0
stress Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic -0.1 +0.0 +0.2 -7.2 -0.1
no stress control Defined media control, aerobic -0.2 -0.1 -0.0 -6.9 -0.0
stress Cadmium acetate 8 uM, anaerobic +0.1 -0.0 +0.0 -7.1 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -1.0 +0.0 -5.8 -0.3
no stress control Defined media control, aerobic +0.1 -0.0 +0.0 -7.2 +0.2
stress Nickel (II) chloride 20 uM, anaerobic +0.2 +0.1 +0.0 -7.1 -0.0
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.6 +0.2 -6.3 -0.1
stress dichromate 5 uM, aerobic +0.0 +0.2 -0.3 -6.8 +0.2
no stress control Defined media control, aerobic -0.2 +0.6 +0.1 -7.2 +0.0
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -0.7 +0.1 -5.9 +0.0
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 -0.2 -0.2 -6.2 -0.0
stress copper (II) chloride 2 uM, anaerobic -0.2 -0.7 +0.5 -5.8 -0.6
no stress control Defined media control, aerobic +0.2 -0.0 +0.4 -7.1 -0.0
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.0 -0.1 -0.2 -6.2 -0.1
stress Cobalt chloride 10 uM, aerobic +0.2 +0.3 +0.0 -7.0 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.2 -0.1 -6.2 -0.0
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.3 +0.1 -6.2 -0.2
stress Uranyl Acetate Dihydrate 200 uM, aerobic +0.1 +0.4 +0.1 -7.0 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.4 +0.2 -5.9 -0.0
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.1 +0.0 -6.3 +0.1
stress Aluminum potassium sulfate dodecahydrate 1 mM, aerobic +0.1 -0.1 +0.0 -6.1 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50 -0.1 +0.2 -0.2 -5.7 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 +0.3 +0.1 -6.2 +0.0
no stress control Defined media control, anaerobic +0.1 -0.1 +0.3 -5.9 +0.0
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50 +0.1 +0.5 -0.0 -5.9 -0.2
stress Uranyl Acetate Dihydrate 200 uM, anaerobic +0.1 -0.1 +0.5 -5.8 -0.0
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50 +0.3 +0.4 -0.0 -5.9 -0.0
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 +0.5 +0.1 -6.2 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50 +0.2 +0.5 +0.3 -5.9 -0.0
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