Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_15410 and IAI47_15415 are separated by 350 nucleotidesIAI47_15415 and IAI47_15420 are separated by 217 nucleotidesIAI47_15420 and IAI47_15425 overlap by 14 nucleotidesIAI47_15425 and IAI47_15430 are separated by 40 nucleotides IAI47_15410: IAI47_15410 - proline--tRNA ligase, at 3,244,688 to 3,246,406 _15410 IAI47_15415: IAI47_15415 - aminoacyl-tRNA hydrolase, at 3,246,757 to 3,247,167 _15415 IAI47_15420: IAI47_15420 - YaeP family protein, at 3,247,385 to 3,247,585 _15420 IAI47_15425: IAI47_15425 - Rho-binding antiterminator, at 3,247,572 to 3,247,832 _15425 IAI47_15430: IAI47_15430 - cytochrome c, at 3,247,873 to 3,248,181 _15430
Group Condition IAI47_15410 IAI47_15415 IAI47_15420 IAI47_15425 IAI47_15430
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. -0.5 +0.2 -0.3 -1.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. -1.0 +0.3 -0.3 -0.8
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -0.9 +0.0 -0.1 -0.6
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50 N.D. -0.7 -0.3 -0.1 -0.3
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -0.6 -0.3 +0.1 -0.7
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. -1.3 +0.4 -0.5 -0.0
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -0.7 -0.1 +0.2 -0.7
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -0.5 -0.1 +0.1 -0.8
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -0.6 +0.1 -0.6 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -0.5 -0.3 +0.3 -0.8
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 N.D. -0.6 +0.1 -0.5 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -0.5 +0.1 -0.4 -0.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. -0.6 -0.2 +0.3 -0.5
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. -0.5 +0.0 +0.3 -0.8
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -0.6 -0.1 +0.3 -0.5
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -0.3 +0.1 +0.2 -0.9
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. -0.3 -0.1 +0.3 -0.8
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -0.6 -0.1 +0.4 -0.6
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50 N.D. -0.3 +0.3 -0.5 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 N.D. -0.2 +0.4 -0.4 -0.4
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -0.2 +0.3 +0.3 -0.7
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -0.6 +0.1 +0.5 +0.1
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. +0.6 -0.4 +0.2 -0.2
nitrogen source Ammonium chloride (N) N.D. -0.5 +0.3 +0.8 -0.1
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. +0.6 -0.2 +0.4 -0.2
nitrogen source nitrogen source nitrite 1mM N.D. -0.3 +0.3 +0.6 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -0.2 -0.0 +0.8 +0.2
stress copper (II) chloride 2 uM, anaerobic N.D. -0.1 +1.2 +0.1 -0.2
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. +0.3 -0.2 +0.3 +0.6
stress copper (II) chloride 2 uM, anaerobic N.D. +0.2 +0.2 +1.0 +0.0
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