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Protein
Homologs
Fitness for 5 genes in
Pantoea sp. MT58
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
IAI47_15410 and IAI47_15415 are separated by 350 nucleotides
IAI47_15415 and IAI47_15420 are separated by 217 nucleotides
IAI47_15420 and IAI47_15425 overlap by 14 nucleotides
IAI47_15425 and IAI47_15430 are separated by 40 nucleotides
IAI47_15410: IAI47_15410 - proline--tRNA ligase, at 3,244,688 to 3,246,406
_15410
IAI47_15415: IAI47_15415 - aminoacyl-tRNA hydrolase, at 3,246,757 to 3,247,167
_15415
IAI47_15420: IAI47_15420 - YaeP family protein, at 3,247,385 to 3,247,585
_15420
IAI47_15425: IAI47_15425 - Rho-binding antiterminator, at 3,247,572 to 3,247,832
_15425
IAI47_15430: IAI47_15430 - cytochrome c, at 3,247,873 to 3,248,181
_15430
Group
Condition
IAI47
_15410
IAI47
_15415
IAI47
_15420
IAI47
_15425
IAI47
_15430
survival
Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
N.D.
-0.5
+0.2
-0.3
-1.2
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
N.D.
-1.0
+0.3
-0.3
-0.8
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
N.D.
-0.9
+0.0
-0.1
-0.6
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50
N.D.
-0.7
-0.3
-0.1
-0.3
survival
Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
N.D.
-0.6
-0.3
+0.1
-0.7
survival
Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
N.D.
-1.3
+0.4
-0.5
-0.0
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
N.D.
-0.7
-0.1
+0.2
-0.7
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
N.D.
-0.5
-0.1
+0.1
-0.8
survival
Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
N.D.
-0.6
+0.1
-0.6
-0.2
survival
Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
N.D.
-0.5
-0.3
+0.3
-0.8
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50
N.D.
-0.6
+0.1
-0.5
-0.2
survival
Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
N.D.
-0.5
+0.1
-0.4
-0.3
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
N.D.
-0.6
-0.2
+0.3
-0.5
survival
Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
N.D.
-0.5
+0.0
+0.3
-0.8
survival
Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
N.D.
-0.6
-0.1
+0.3
-0.5
survival
Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
N.D.
-0.3
+0.1
+0.2
-0.9
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
N.D.
-0.3
-0.1
+0.3
-0.8
survival
Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
N.D.
-0.6
-0.1
+0.4
-0.6
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50
N.D.
-0.3
+0.3
-0.5
-0.2
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50
N.D.
-0.2
+0.4
-0.4
-0.4
survival
Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
N.D.
-0.2
+0.3
+0.3
-0.7
survival
Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
N.D.
-0.6
+0.1
+0.5
+0.1
survival
Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
N.D.
+0.6
-0.4
+0.2
-0.2
nitrogen source
Ammonium chloride (N)
N.D.
-0.5
+0.3
+0.8
-0.1
survival
Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
N.D.
+0.6
-0.2
+0.4
-0.2
nitrogen source
nitrogen source nitrite 1mM
N.D.
-0.3
+0.3
+0.6
+0.2
survival
Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
N.D.
-0.2
-0.0
+0.8
+0.2
stress
copper (II) chloride 2 uM, anaerobic
N.D.
-0.1
+1.2
+0.1
-0.2
survival
Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
N.D.
+0.3
-0.2
+0.3
+0.6
stress
copper (II) chloride 2 uM, anaerobic
N.D.
+0.2
+0.2
+1.0
+0.0
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IAI47_15420
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