Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_15240 and IAI47_15245 are separated by 3 nucleotidesIAI47_15245 and IAI47_15250 overlap by 4 nucleotidesIAI47_15250 and IAI47_15255 are separated by 220 nucleotidesIAI47_15255 and IAI47_15260 overlap by 20 nucleotides IAI47_15240: IAI47_15240 - 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, at 3,213,548 to 3,214,042 _15240 IAI47_15245: IAI47_15245 - allantoate amidohydrolase, at 3,214,046 to 3,215,299 _15245 IAI47_15250: IAI47_15250 - alanine--glyoxylate aminotransferase family protein, at 3,215,296 to 3,216,531 _15250 IAI47_15255: IAI47_15255 - amino acid ABC transporter ATP-binding protein, at 3,216,752 to 3,217,483 _15255 IAI47_15260: IAI47_15260 - amino acid ABC transporter permease, at 3,217,464 to 3,218,120 _15260
Group Condition IAI47_15240 IAI47_15245 IAI47_15250 IAI47_15255 IAI47_15260
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.4 +0.0 -1.3 -0.4
stress copper (II) chloride 2 uM, anaerobic -0.5 +0.0 -0.0 -0.5 -0.6
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.6 +0.0 -0.2 -0.3 -0.6
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.0 -0.3 -0.4 -0.2 -0.7
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.0 -0.1 -0.1 -0.2 -0.1
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 +0.1 -0.4 +0.0 -0.8
nitrogen source Ammonium chloride (N) -0.5 +0.3 -0.3 +0.1 -0.6
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.4 +0.1 +0.1 -0.8 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 -0.1 +0.0 -0.4 -0.9
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.3 +0.3 -0.0 -0.3 -0.5
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 -0.1 -0.1 -0.3 -0.7
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 +0.1 -0.5 +0.5 +0.2
carbon source Ying_all64 rep C; time point 3 +0.7 +0.1 -0.2 +0.3 -0.2
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.3 +0.6 +0.3 +0.3 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 +0.2 +0.2 +0.5 +0.3
stress copper (II) chloride 2 uM, anaerobic +0.3 -0.5 +0.5 +0.9 -0.1
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 +0.5 +0.1 -0.1 +0.4
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.6 +0.3 +0.5 -0.1 -0.0
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.6 +0.0 +0.5 -0.1 +0.2
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 +0.4 +0.7 +0.4 +0.4
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.5 +0.3 +0.0 +0.1 +0.4
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.5 +0.2 +0.2 +0.4 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 +0.2 +0.7 +0.4 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=6hrs; Outgrowth=LBkan50 +0.9 -0.1 -0.1 +0.0 +0.7
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=6hrs; Outgrowth=LBkan50 +0.5 -0.1 +0.4 +0.1 +0.7
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.0 +0.4 +0.1 +0.5 +0.7
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.0 +0.4 +0.2 +0.9 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 +0.4 +0.4 +0.3 +0.5
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.0 +0.9 +0.4 +0.2 +0.4
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.5 +0.3 +0.3 +0.3 +0.7
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IAI47_15240
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IAI47_15245
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IAI47_15255
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IAI47_15260
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