Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_15165 and IAI47_15170 are separated by 25 nucleotidesIAI47_15170 and IAI47_15175 are separated by 36 nucleotidesIAI47_15175 and IAI47_15180 are separated by 244 nucleotidesIAI47_15180 and IAI47_15185 overlap by 30 nucleotides IAI47_15165: IAI47_15165 - ABC transporter permease, at 3,198,089 to 3,199,090 _15165 IAI47_15170: IAI47_15170 - sugar ABC transporter substrate-binding protein, at 3,199,116 to 3,200,183 _15170 IAI47_15175: IAI47_15175 - DNA polymerase IV, at 3,200,220 to 3,201,275 _15175 IAI47_15180: IAI47_15180 - murein L,D-transpeptidase, at 3,201,520 to 3,202,266 _15180 IAI47_15185: IAI47_15185 - class II glutamine amidotransferase, at 3,202,237 to 3,203,004 _15185
Group Condition IAI47_15165 IAI47_15170 IAI47_15175 IAI47_15180 IAI47_15185
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.0 +0.1 -0.1 -0.4 -0.8
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 -0.1 +0.0 -0.5 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50 -0.3 -0.1 -0.2 -0.4 -0.0
carbon source Ying_all64 rep C; time point 3 -0.1 -0.3 +0.0 -0.4 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -0.2 -0.1 -0.4 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50 -0.3 -0.3 +0.1 -0.4 +0.0
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 +0.0 +0.2 -0.4 -0.2
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 -0.3 +0.2 +0.2 -0.5
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 +0.2 -0.4 +0.0 -0.5
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -0.1 -0.1 -0.5 +0.1
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 +0.2 -0.4 -0.3 +0.1
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.6 +0.0 -0.2 -0.1 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50 -0.3 -0.2 +0.1 -0.4 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.0 -0.0 -0.2 -0.6 +0.3
carbon source Ying_AminoAcid20 rep A; time point 3 +0.1 +0.1 +0.1 -0.5 -0.3
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.5 +0.3 -0.2 +0.1 -0.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 -0.3 -0.0 -0.1 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50 -0.3 +0.1 +0.1 -0.4 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.0 +0.1 -0.2 -0.4 +0.3
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 -0.4 -0.2 -0.0 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 +0.1 -0.3 -0.4 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.1 +0.3 -0.3 -0.1
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 +0.2 +0.2 +0.1 -0.4
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 -0.2 -0.3 -0.0 +0.7
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 +0.1 +0.0 +0.1 +0.4
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 +0.2 -0.1 +0.2 +0.3
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.2 +0.3 +0.2 +0.0
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.3 +0.3 -0.4 +0.4
stress copper (II) chloride 2 uM, anaerobic +0.7 -0.0 +0.2 +0.2 -0.3
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 +0.2 +0.1 -0.1 +0.8
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IAI47_15165
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IAI47_15170
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IAI47_15180
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IAI47_15185
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