Fitness for 5 genes in Pantoea sp. MT58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 309 experiments or choose conditions or try the comparative fitness browser

500 ntIAI47_15000 and IAI47_15005 are separated by 170 nucleotidesIAI47_15005 and IAI47_15010 are separated by 99 nucleotidesIAI47_15010 and IAI47_15015 are separated by 342 nucleotidesIAI47_15015 and IAI47_15020 are separated by 57 nucleotides IAI47_15000: IAI47_15000 - CPBP family intramembrane metalloprotease, at 3,164,795 to 3,165,445 _15000 IAI47_15005: IAI47_15005 - hypothetical protein, at 3,165,616 to 3,165,786 _15005 IAI47_15010: IAI47_15010 - hypothetical protein, at 3,165,886 to 3,166,119 _15010 IAI47_15015: IAI47_15015 - OsmC family protein, at 3,166,462 to 3,166,890 _15015 IAI47_15020: IAI47_15020 - FMN-dependent L-lactate dehydrogenase LldD, at 3,166,948 to 3,168,135 _15020
Group Condition IAI47_15000 IAI47_15005 IAI47_15010 IAI47_15015 IAI47_15020
no stress control Defined media control, anaerobic +0.2 -3.1 -0.1 +0.1 +0.1
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 -1.6 +0.0 -0.9 -0.1
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.0 -1.8 -0.2 -0.4 -0.0
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -2.6 +0.3 +0.3 -0.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -2.0 +0.1 -0.1 +0.0
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.0 -1.4 -0.2 -0.5 +0.0
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -1.4 -0.0 -0.4 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -2.1 -0.1 -0.0 -0.0
nitrogen source nitrogen source nitrite 0.5mM -0.3 -1.5 -0.2 -0.0 -0.0
carbon source Ying_all64 rep A; time point 2 -0.1 -1.7 -0.1 +0.1 -0.1
carbon source Ying_Others16 rep A; time point 3 -0.3 -1.7 +0.1 -0.1 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=1hrs; Outgrowth=LBkan50 +0.1 -1.6 +0.1 -0.4 +0.0
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 -2.3 +0.5 -0.2 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 +0.1 -1.2 -0.3 -0.4 +0.2
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 -1.6 +0.3 -0.2 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 -1.3 -0.4 +0.2 +0.0
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 -1.6 +0.1 +0.2 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -1.8 +0.1 +0.1 +0.3
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.5 -1.2 +0.1 -0.1 -0.4
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 -1.4 +0.0 +0.2 +0.2
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -1.2 +0.3 -0.4 -0.0
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 -1.6 +0.3 +0.2 -0.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.0 -1.4 +0.4 +0.2 +0.2
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.9 +0.5 -0.3 -0.1
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 -0.6 +0.4 -0.6 +0.1
survival Survival; Treatment=UGA synthetic gw pH3.9; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.3 +1.3 +0.0 -0.2 -0.1
survival Survival; Treatment=FW106 (pH3.9); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 +1.2 -0.3 +0.3 -0.3
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 +1.6 +0.2 -0.4 +0.0
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 +1.2 +0.4 +0.1 +0.0
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 +0.0 +1.4 -0.1 -0.0 +0.2
remove
IAI47_15000
plot		 remove
IAI47_15005
plot		 remove
IAI47_15010		 remove
IAI47_15015
plot		 remove
IAI47_15020
plot