Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_14980 and IAI47_14985 are separated by 13 nucleotidesIAI47_14985 and IAI47_14990 are separated by 158 nucleotidesIAI47_14990 and IAI47_14995 are separated by 277 nucleotidesIAI47_14995 and IAI47_15000 are separated by 213 nucleotides IAI47_14980: IAI47_14980 - hypothetical protein, at 3,160,663 to 3,160,914 _14980 IAI47_14985: IAI47_14985 - hypothetical protein, at 3,160,928 to 3,161,245 _14985 IAI47_14990: IAI47_14990 - hypothetical protein, at 3,161,404 to 3,161,700 _14990 IAI47_14995: IAI47_14995 - EAL domain-containing protein, at 3,161,978 to 3,164,581 _14995 IAI47_15000: IAI47_15000 - CPBP family intramembrane metalloprotease, at 3,164,795 to 3,165,445 _15000
Group Condition IAI47_14980 IAI47_14985 IAI47_14990 IAI47_14995 IAI47_15000
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.3 -0.6 -0.8 -0.0 -0.4
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.7 -0.7 -0.4 -0.1 +0.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.9 -0.1 -0.0 +0.2 -0.6
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.1 +0.0 -0.4 -0.1 +0.3
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -1.2 -0.1 +0.1 +0.1 +0.1
survival Survival; Treatment=FW106 (pH3.9); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.5 -1.1 +0.6 +0.0 +0.2
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 -0.5 +0.3 -0.1 +0.1
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.3 -0.7 -0.1 +0.2 +0.3
stress copper (II) chloride 2 uM, anaerobic -0.1 -0.7 +0.2 +0.2 -0.3
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.6 -0.3 +0.3 -0.0 +0.4
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 -0.7 +0.7 +0.1 -0.0
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.0 +0.6 +0.1 -0.0 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.8 +0.7 +0.1 +0.1 -0.0
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.6 +0.6 +0.2 +0.0 -0.1
carbon source Ying_sugar7 rep A; time point 2 +0.4 -0.3 +0.4 +0.2 -0.3
carbon source Ying_sugar7 rep C; time point 2 +0.8 -0.1 -0.6 +0.2 +0.1
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.2 +0.6 +0.2 -0.4
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +1.1 -0.4 +0.1 +0.0 -0.2
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.8 -0.3 +0.2 +0.1 -0.1
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 +0.5 +0.2 +0.3 +0.5
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 +0.5 -0.3 +0.2 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.4 +0.7 -0.1 +0.1 -0.2
carbon source Ying_sugar7 rep C; time point 3 +0.6 +0.8 -0.1 +0.0 -0.0
nitrogen source nitrogen source Ammonium chloride 20mM +0.6 +0.6 +0.2 -0.1 +0.2
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.5 +0.7 +0.3 +0.2 -0.0
stress copper (II) chloride 2 uM, anaerobic +1.1 -0.3 +0.6 +0.2 +0.0
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.5 +0.9 +0.1 +0.1 -0.1
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.5 +0.9 -0.1 +0.2 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 +0.9 +0.3 +0.9 -0.0 +0.1
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.8 +0.5 +0.7 +0.3 -0.0
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IAI47_14980
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IAI47_14985
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IAI47_14995
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IAI47_15000
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