Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_14810 and IAI47_14815 are separated by 103 nucleotidesIAI47_14815 and IAI47_14820 are separated by 207 nucleotidesIAI47_14820 and IAI47_14825 are separated by 0 nucleotidesIAI47_14825 and IAI47_14830 are separated by 513 nucleotides IAI47_14810: IAI47_14810 - tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA, at 3,122,319 to 3,123,389 _14810 IAI47_14815: IAI47_14815 - DUF479 domain-containing protein, at 3,123,493 to 3,124,074 _14815 IAI47_14820: IAI47_14820 - inositol monophosphatase, at 3,124,282 to 3,125,094 _14820 IAI47_14825: IAI47_14825 - histidine-type phosphatase, at 3,125,095 to 3,126,351 _14825 IAI47_14830: IAI47_14830 - proline-specific permease ProY, at 3,126,865 to 3,128,217 _14830
Group Condition IAI47_14810 IAI47_14815 IAI47_14820 IAI47_14825 IAI47_14830
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.7 -0.1 -0.0 -0.4 -0.4
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.6 -0.8 +0.1 -0.2 +0.1
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.7 -0.4 -0.0 -0.2 -0.1
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.4 -0.4 -0.3 -0.1 -0.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.3 -0.7 -0.3 +0.1 -0.1
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.6 -0.2 -0.2 -0.1 -0.2
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.8 +0.1 -0.3 -0.1 -0.0
carbon source Ying_OrganicAcid7 rep B; time point 3 -1.0 -0.2 -0.1 +0.1 +0.0
carbon source Ying_Nucleobase14 rep A; time point 3 -1.0 -0.3 +0.0 +0.1 +0.1
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.7 -0.3 +0.1 -0.2 +0.2
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 -0.5 +0.1 -0.3 -0.0
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.0 +0.3 -0.0 -0.2 -0.0
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.7 +0.1 -0.2 -0.1 -0.1
carbon source Ying_sugar7 rep B; time point 3 -1.0 -0.4 +0.3 +0.1 +0.1
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.6 +0.2 -0.1 -0.3 +0.0
carbon source Ying_Nucleobase14 rep B; time point 3 -1.0 -0.1 +0.1 +0.1 +0.1
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.0 +0.1 -0.1 +0.2 +0.0
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -0.2 +0.2 -0.5 +0.1
nitrogen source Ammonium chloride (N) +0.2 +0.3 -0.6 -0.2 -0.2
survival Survival; Treatment=FW106 (pH3.9); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.3 -0.0 -0.5 +0.3 +0.1
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.6 +0.4 +0.1 -0.1 -0.1
stress copper (II) chloride 2 uM, anaerobic -0.7 +0.6 -0.4 +0.0 +0.1
carbon source Ying_OrganicAcid7 rep A; time point 3 -0.8 +0.5 +0.0 -0.1 +0.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.5 -0.3 +0.3 -0.1 -0.0
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.3 +0.7 -0.1 +0.2 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 -0.3 +0.6 -0.1 +0.3 +0.2
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 +0.5 +0.2 +0.2 +0.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.6 +0.6 -0.1 +0.1 -0.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.7 +0.5 +0.1 +0.0 -0.0
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=6hrs; Outgrowth=LBkan50 +0.4 +0.4 +0.3 +0.1 +0.1
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IAI47_14815
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IAI47_14825
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IAI47_14830
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