Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_14715 and IAI47_14720 overlap by 47 nucleotidesIAI47_14720 and IAI47_14725 are separated by 66 nucleotidesIAI47_14725 and IAI47_14730 are separated by 232 nucleotidesIAI47_14730 and IAI47_14735 overlap by 1 nucleotides IAI47_14715: IAI47_14715 - 2-dehydropantoate 2-reductase, at 3,105,203 to 3,106,123 _14715 IAI47_14720: IAI47_14720 - protein deglycase YajL, at 3,106,077 to 3,106,673 _14720 IAI47_14725: IAI47_14725 - tRNA 4-thiouridine(8) synthase ThiI, at 3,106,740 to 3,108,188 _14725 IAI47_14730: IAI47_14730 - exodeoxyribonuclease VII small subunit, at 3,108,421 to 3,108,663 _14730 IAI47_14735: IAI47_14735 - (2E,6E)-farnesyl diphosphate synthase, at 3,108,663 to 3,109,562 _14735
Group Condition IAI47_14715 IAI47_14720 IAI47_14725 IAI47_14730 IAI47_14735
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.6 -0.3 +0.1 -3.5 N.D.
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -0.0 -0.1 -3.4 N.D.
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 +0.5 -0.3 -3.5 N.D.
stress Uranyl Acetate Dihydrate 200 uM, aerobic -0.4 -0.1 -0.2 -2.4 N.D.
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 -0.1 -0.2 -3.0 N.D.
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 +0.2 -0.3 -3.0 N.D.
stress copper (II) chloride 1 uM, anaerobic -0.2 +0.3 -0.1 -2.8 N.D.
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 -0.3 -0.6 -1.5 N.D.
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 -0.2 -0.1 -2.8 N.D.
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 +0.3 -0.2 -2.6 N.D.
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 +0.4 -0.2 -3.0 N.D.
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.3 -0.1 -3.0 N.D.
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.5 -0.2 -2.1 N.D.
no stress control Defined media control, aerobic -0.5 -0.2 -0.1 -1.8 N.D.
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 +0.1 -0.2 -2.2 N.D.
stress copper (II) chloride 2 uM, anaerobic -0.5 -0.0 -0.4 -1.5 N.D.
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.3 -0.2 -0.2 -1.8 N.D.
carbon source Ying_OrganicAcid7 rep A; time point 3 +0.1 -0.1 -0.0 -2.4 N.D.
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 +0.3 -0.1 -2.3 N.D.
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 +0.1 -0.3 -2.0 N.D.
survival Survival; Treatment=FW106 (pH3.9); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.3 -0.2 -0.1 -2.1 N.D.
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 +0.3 -0.3 -1.7 N.D.
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 +0.7 -0.6 -1.1 N.D.
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 +0.0 -0.5 +2.0 N.D.
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 -0.4 -0.2 +2.2 N.D.
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 -0.2 -0.1 +2.4 N.D.
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 +0.5 -0.2 +1.9 N.D.
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 +0.6 -0.0 +1.9 N.D.
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.0 -0.1 +0.3 +2.6 N.D.
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 -0.0 -0.1 -0.2 +3.3 N.D.
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IAI47_14715
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IAI47_14720
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IAI47_14730
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IAI47_14735
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