Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_14635 and IAI47_14640 are separated by 249 nucleotidesIAI47_14640 and IAI47_14645 are separated by 214 nucleotidesIAI47_14645 and IAI47_14650 are separated by 186 nucleotidesIAI47_14650 and IAI47_14655 are separated by 134 nucleotides IAI47_14635: IAI47_14635 - peptidylprolyl isomerase, at 3,085,475 to 3,087,343 _14635 IAI47_14640: IAI47_14640 - DNA-binding protein HU-beta, at 3,087,593 to 3,087,865 _14640 IAI47_14645: IAI47_14645 - endopeptidase La, at 3,088,080 to 3,090,434 _14645 IAI47_14650: IAI47_14650 - ATP-dependent protease ATP-binding subunit ClpX, at 3,090,621 to 3,091,892 _14650 IAI47_14655: IAI47_14655 - ATP-dependent Clp endopeptidase proteolytic subunit ClpP, at 3,092,027 to 3,092,650 _14655
Group Condition IAI47_14635 IAI47_14640 IAI47_14645 IAI47_14650 IAI47_14655
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.9 -1.9 N.D. N.D. N.D.
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 -1.6 N.D. N.D. N.D.
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.6 -1.2 N.D. N.D. N.D.
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 -1.1 N.D. N.D. N.D.
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -1.4 N.D. N.D. N.D.
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.9 -0.8 N.D. N.D. N.D.
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 -1.3 N.D. N.D. N.D.
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 -1.1 N.D. N.D. N.D.
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 -0.9 N.D. N.D. N.D.
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 -0.8 N.D. N.D. N.D.
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -1.0 N.D. N.D. N.D.
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -1.0 N.D. N.D. N.D.
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50 -0.2 -1.0 N.D. N.D. N.D.
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 -0.7 N.D. N.D. N.D.
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -0.8 N.D. N.D. N.D.
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -0.9 N.D. N.D. N.D.
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -0.9 N.D. N.D. N.D.
stress copper (II) chloride 2 uM, anaerobic +0.4 -1.0 N.D. N.D. N.D.
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 -0.8 N.D. N.D. N.D.
stress dichromate 5 uM, aerobic +0.3 -0.8 N.D. N.D. N.D.
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=1hrs; Outgrowth=LBkan50 -0.3 +0.8 N.D. N.D. N.D.
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 +1.0 N.D. N.D. N.D.
carbon source Ying_Others16 rep C; time point 3 +0.8 +0.4 N.D. N.D. N.D.
carbon source Ying_AminoAcid20 rep C; time point 2 +0.5 +0.7 N.D. N.D. N.D.
carbon source Ying_AminoAcid20 rep B; time point 2 +0.5 +0.7 N.D. N.D. N.D.
carbon source Ying_AminoAcid20 rep A; time point 2 +0.5 +0.7 N.D. N.D. N.D.
carbon source Ying_Others16 rep B; time point 3 +0.7 +0.5 N.D. N.D. N.D.
carbon source Ying_AminoAcid20 rep A; time point 3 +0.6 +0.9 N.D. N.D. N.D.
carbon source Ying_AminoAcid20 rep C; time point 3 +0.6 +1.1 N.D. N.D. N.D.
carbon source Ying_AminoAcid20 rep B; time point 3 +0.6 +1.2 N.D. N.D. N.D.
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